Ll_transcript_315196

• Id Trinity: TRINITY_DN46757_c6_g7_i5
• Name Transcript: Ll_transcript_315196
• Sequence: CTTTAGCCCAAACCCGAAACCGAATCTAACCCGACCCGGACATCCATTTCTCTCTCCCACTATTCATTACTATCGCTCCACGCTAACCGGTACTTCACCA CCGTGCACGGCCACATAACCCCGCCGTGAAAAGCCGCCTACACTCCACCACTACTTCCACCCACGCTGCCGTCTTCCGCCACCTGCAAGCTGATGAAGAA GCTCGATTTCAGTCGCCATTACGGCTTCCTGGCCTCCAACCTTAGAATCTCCGCCAAAACACCAACCATGGAGATGGAGTCCCAGATTCTCCAATACAGC AAAGATGGCTCTCTCTCTCAAGCCCTCAAACTCCTCAACACCCTCAACAAAAACTTCTCTTCCCATCTCACTGTTAAACCAGTACTATACGCTTCCCTCC TCCAAACCTGCATCAAAACCACTTCCTTCACCCATGGTACCCAACTCCACGCCCATGTCCTCAAATCAGGTCTTCAAAATGACCGCTTCGTTGGTAACAG CTTGCTCTCCCTCTACTTTAAACTATGTCCCCGTATCGGCGAAGCTCGTAGAGTCTTCGATAAGCTTTATGTAAAAGACGTGATATCTTGGACTTCAATG ATTTCTGGGTATGTTAAGGTTGGTGAACACCAGGAATCACTTCAATTGTTCTTTGAAATGGTGGATTTGGGTGTTGAGCCTAATGGGTTCACTTTGTCCT CTGTGATTAAGGCTTGTTCTGAACTTGGGTACTTGAAACTTGGTAGATGTTTTCATGGGGTGGTTATAAATCATGGGTTTGACAACAATCATGTTATTAT AAGTGCTTTAATTGATATGTATGGGAGGAATCATGAGGTGGGGGATGGAAGGAAGTTGTTTGATGAATTGCCTGAACCAGATGCTGTGTGTTGGACATCA GTTATTTCAGCGTTTGCGAGGAATGATATGTTTAAGGAAGCTTTGGATTTTTTTTATGTTATGCATATGGATCATGGGTTGGAGCCAGATGGGTTTACTT TTGGGACATTGTTGGCTGCTTGTGCGAATTTGGGGTGGTTGAGGCAGGGGAAAGAGGTGCATGCCAAAGTTGTTACTTCTGGGATATGTGGGAATGTGGT TGTCGATAGTAGTCTCTTAGATATGTATGGAAAATGTGGCTTGGTTCAATGGTCTAGGAGTATTTTTGATAGGATGAGCTTTAAGAATTCAGTGTCTTGG AGTGCTATGCTTGGTGTGTATTGCCAAAATGGAGAATGTGAAACTGTGCTGAATCTTGTTAGGGAGAGGAGAGTTGCAGATCTTTACAGCTTTGGGACTA TTATTCGTGCATGTTCAGGGCTGGCTGCTGTTAGACAAGGGAAAGAGGTTCATTGTCAGTATGTAAGAAAGGGTGGTTGGGGAGATGTTATAGTAGAGTC TGCCATGGTTGATCTATACGCGAAATGTGGGTGCGTTGATTTTGCACACAGATTGTTCTTGAATATGCAAGTTAAAAATTTGATAACGTGGAACTCAATG ATTGGTGGGTTTGCACAGAATGGAAGAGGGGAAGAAGCACTGGCCTTATTTGAGGATATGATCAAAGAGGGGGTGAAGCCTGACTATATTACTTTTATTA ATGTTCTTTTTGCTTGTAGTCATACGGGTTTGATTGATCAAGGGAGAAAATATTTCGCTTCAATGACAGACGAATATGAGATTAAGCCTGGAGTTGAGCA TTACAATTGTATGATTGATCTCCTGGGCCGTGCTGAGCTAATAGAGGAGGCTGAAAGTTTACTAGAGAATGCAGACTGCAGACATGATCAATCGCTTTGG GCGGTTCTTCTTGGGGCTTGCACTAAATGCTCAGACTATTTAACTGCGGAACGTGTTGCAAGAAAGATGATTGAGCTGGATCCTAATTTTCATTTAAGCT ATGTTCTGCTTGGCAACATTTATAGAGCAGTTGGCCGATGGAATGATGCTCTGGAGATCAGGAAGTTAATGGAAGATAGAGGGGTTAAGAAGATTCCAGG GAAGAGCTGGGTTGATAATGAGAATCAGAAAGGTTCTCGTCTTGATTTAACCAAGATGATTGTTGCTGCGTAAAGCAGTGTTCTAGCATGGCATTGGTTG TGTGATGAGTAGAAATTGGCAGCTGGATTTTTTAACTGCATCTGATACTACATCAAATGCACCCTCATTTCAAACTGCTTAATCTCTTAGCTGTCATGGA AGGTTATGAGCTAGGATTTACCCTTATGGAAGGGTTATGCTACCAGATTAACTTTTGCAAGCATTAGCTTTATGTAGAATATCAGAAGATTCTATGGTGC TGCTCTGCATTTCAAGAATGCTTTGTCGCCTGACTTTGAGATGGTACATTATGGCATCCTTTGGTCCATGTAGTCAACCCTACCTAGTGGGAAAAGGTTT ATCTATTCATTTCTCAGCATAGGATTGTTGGGTGCCTAGTTGCAGAACCAATTGGAGTGCCTTGGTCAATTGCTGGACATTATATAGGGCGAGGAAAAAA GAAATAAAGTCATATGCAACCACTCTCCAGATCAGGAATATTATTTTTCGAAGAGAAGTTGAAAAAATAGTCATTTCAATGTGATTCTGAGGGAATGGTT GGATAACATGGCAGGGCAATCTTCTGTGAAAACAATGCAGTAGCTGCTGGTTGTGTTATTAGAGCCATTGGGTTACTCCTTCCAACAAAAGAAAAGGAAT CTCTTGCCAATTGCTAGGTGCAGTGAGCCAATCTCAGCTGGGAAGGCATTAACATTTCGTTACGCTGGAAGTAGATCGTTCTTGGTGTATAAAGCCAACA AGACATAGTCATAGGCCATGCTCATCTCTAATGAATACATCAAGCCACATCCTGATTAGTTATTATTTCTGCTCTTTGATGATTTAGACAAACGTATGCT ATTATTCTTGCATGGTAGTAATTGTTCACATAGTTTATAAGCTGTGAAATCCTTGATGCCATCCTCTTCTTCTTGTTGTTAAGGCTTAGTTATCATTCTT AGTTGATTTTCCTATTAATTTTGTTAGTATGGATGTGTTGGTTGATAATAACATGGACCTAATCTTCAAGTTTAAGAAAAGAAGTCTTGAGGTCGAGTTA GCAAAGATATATGTGAGAATATCCTCTTTCCTTTTATTCAAACATCATAGGAGGCTCATTGAAGTTATATAGATAATCTATTTTTGGCCTACACAAATTT ATCTTATTT
• Tissue: pods
• Gene name: LI_gene_146957;
• Additional information: details;

Expression of Ll_transcript_315196

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.4
• PS2: 1.2
• PS3: 0.6
• PW1: 0.2
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315196

• Blastp: Pentatricopeptide repeat-containing protein At1g03540 from Arabidopsis with 59.47% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g03540 from Arabidopsis with 59.18% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G03540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415827.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;