Ll_transcript_315037

• Id Trinity: TRINITY_DN46759_c1_g1_i12
• Name Transcript: Ll_transcript_315037
• Sequence: GAAGAAATGAAAATGAAAAGGTTTGAAGATATTTTAATATGAATTTGAGAGAAGATATTTTGATTATATATGAATTGATTGATATGAAATTTGGGAAGTT GTTAGGAAATAGTTATGGAAAGAAGTTGCAAAAGAGAGAATAATATAAAATAGAGATGGAAGTTGGGCCGAAAGCCCAGTTTGTTGTGAATGATAGAATT GGAAACGTGGTTCCCTATAAGCAATGACACAATCCTGAGATCTCTACACCTTTCATCAACAACTTCACAACTCAGAGGTATTCCAACATTTTGATTTTAC CAATTCCTTCAAAATATGTTTTATCATTTTCATTTTACCTTTCTTCAATTCCTTCAATATATCTTTTATCATTTTCATTTTACCTTTTTCAATTCCTTCA TCAAAAACGACGCCGTGCTTTCATAGACGACCACGCGCTCAGACGCTTTCATCCACCGCCGTACGCTATCATCGCGATCTTCCTCAAACGACGTCGTTAT TCACAAACTTATTTTCCTCAAAATCAATAGGTACAGTTTTATTCCCCTTACGATCCTTTCCTTTTTTTTCAATCTTATTGGACTTGTTTTCAATTTCCTT CAAAATTGTTATTCTGAGATGCTAGGTGAACGTTAATTCGCCAGAACTACGTGTTTTCTCTGTCTGAGAGAATTATGTATTTTTTGGCTGATGCTGAGAA TTTTTTGTTTTTTCGTTGTTACGCCTCTTTGATCTTCAGCTTAAAGGACTCTTTGTACTGTTTCTTTTCTGATTTCATTATTCACTTATTTTGCAAATTG TTGTCAATTTTGTGCTTCACATCAAATTTGGTTTCGGCTTTGATAATAGGAAACTCTTGTTGAGTCAATTAAGTGGTGAAGATCATTGTTACGTGGTTCA CCTACTGTTTCCGGTTATACGTGTTATTTTCAGGCCAATGGCATCTTCTTCAGACGCATGGATGAAGGAATACAATGAAGCAGTTAAACTCGCTGATGAT ATCAATGGCATGATTTCTGAGCGGAGTTCATTTCCTTCATCTGGACCAGAAACCCAACGCCATGCATCTGCTATAAGAAGGAAGATTACGATATTAGGGA CCAGACTTGATAGCTTGCAATCCCTTCTATCAAAGAACCCTGGAAAGTCTGAGAAGGAGATGAATCGTCGCAAGGACACACTTCTAAATTTAAGATCGAA AGTGAACCAAATGGCTTCAACATTGAACATGTCTAACTTTGCAAACAGGGATAGTTTGCTTGGGCCAGATATAAAACCAGATGCAATGAGCAGAACCGTT GGCCTGGACAACAGTGGACTTGTTGGACTTCAACGTCAAATTATGAAAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTAATAAGTACGAAAC ATATTGCACTGGCAGTGAATGAAGAACTGGGGTTACACACGAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGT GCAGAAGAACTTGGCCGTTTTGAACAAACGTACAAAAGGTGGTTGCTCGTGCTTGTGCATGCTTTTATCGGTGGTTGGTATAGTTGTTTTGGTTCTTGTC ATATGGCTGTTGGTCAAATATTTGTAATAATAATGATAAACATGCCAACTCATTATGCTTCTGTCTTTGGAATTGGATGTATGCTTTCAAACATCATAAC TTTGTTTCATTTTTATTCGTCGAATTTGAAGGTTTTATCACTTTTATGTCTGTGTGGTCTTGTAAATGTAAAGTATGAAATCGGAAGTGACCCGTTAATG CCTACTTATAATAACAATCGATTCCGCTGGGATGGGAGAATAGTCAAAATACTTGTGCTATGTACTTTGTATTTATCCTAAAATTATAAGTTATATTATA TAAAAATGAGGATCATTAG
• Tissue: pods
• Gene name: LI_gene_146966;
• Additional information: details;

Expression of Ll_transcript_315037

FPKM

• PAB: 6.3
• PNAB: 2
• PS1: 4.8
• PS2: 3.4
• PS3: 6.3
• PW1: 1.8
• PW2: 3.5
• PW3: 6.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315037

• Blastp: Syntaxin-51 from Arabidopsis with 74.14% of identity
• Blastx: Syntaxin-51 from Arabidopsis with 74.41% of identity
• Eggnog: syntaxin(ENOG410ZZA3)
• Kegg: Link to kegg annotations (AT1G16240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426307.1)
• Pfam: SNARE domain (PF05739.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;