Ll_transcript_315038

• Id Trinity: TRINITY_DN46759_c1_g1_i13
• Name Transcript: Ll_transcript_315038
• Sequence: GAAGAAATGAAAATGAAAAGGTTTGAAGATATTTTAATATGAATTTGAGAGAAGATATTTTGATTATATATGAATTGATTGATATGAAATTTGGGAAGTT GTTAGGAAATAGTTATGGAAAGAAGTTGCAAAAGAGAGAATAATATAAAATAGAGATGGAAGTTGGGCCGAAAGCCCAGTTTGTTGTGAATGATAGAATT GGAAACGTGGTTCCCTATAAGCAATGACACAATCCTGAGATCTCTACACCTTTCATCAACAACTTCACAACTCAGAGACGACCACGCGCTCAGACGCTTT CATCCACCGCCGTACGCTATCATCGCGATCTTCCTCAAACGACGTCGTTATTCACAAACTTATTTTCCTCAAAATCAATAGGTACAGTTTTATTCCCCTT ACGATCCTTTCCTTTTTTTTCAATCTTATTGGACTTGTTTTCAATTTCCTTCAAAATTGTTATTCTGAGATGCTAGGTGAACGTTAATTCGCCAGAACTA CGTGTTTTCTCTGTCTGAGAGAATTATGTATTTTTTGGCTGATGCTGAGAATTTTTTGTTTTTTCGTTGTTACGCCTCTTTGATCTTCAGCTTAAAGGAC TCTTTGTACTGTTTCTTTTCTGATTTCATTATTCACTTATTTTGCAAATTGTTGTCAATTTTGTGCTTCACATCAAATTTGGTTTCGGCTTTGATAATAG GAAACTCTTGTTGAGTCAATTAAGTGGTGAAGATCATTGTTACGTGGTTCACCTACTGTTTCCGGTTATACGTGGTTCGTCATTTTTATATGACTTATTT CATAAAGAATCCGGTATGTGGTATGTAGGCTAAACGAGGGAACCAAGTAACTGGCTAAGATAATGATGGAAGATGAAGTTTCAGTGGGCTAATTAAGAAT CATGTGAATGATGTTTTTGGCTAGCTGGAATAGTTTTAACGGAAAAGTTAGCGCTGTGGTTAGTATTCATCCGTGAGAGACAGAAGTAGCCTGTGACGAC GATGTTTACATAATAAATTCCTTCATTGTTAGTGATGATAAAATCAGTGGAAGTATTGTCTTAAGGAGTGGACGAGAATCTTCTGAATATTTGTATTTTT GTTCTTTGATTTCAAACTTTGGCTGTTTTCGTTTTACTGAGTGTTTAAATGCTTAAGCGAGCAGGAGATTCCATCCTGTGGAAGGAGAGAAGCCTGGTTG TGGTTTTGTTAATTTGTGAGATGTATATAGGAGCTACTCGTTTTAGTTTTTTTCTTCTTTTCGAATTTAAATATAGAAGAAATCGGGGAGAGCATTTTTT AGGCTTATTTATTATGTAATTTATATGTGAAAATAAATATATATGTATATACGTACCTGTACTCTACATTTTCGGAATATAGTGTACCCCATGCCCGGTA CTACCACGTATCCTTGTCGTTGCAAAACTACTATAAATCACCATTTGTCTTTGGGGTTCTTAATTTATCATATATTTTCTTTCTTTCAGTTATTTTCAGG CCAATGGCATCTTCTTCAGACGCATGGATGAAGGAATACAATGAAGCAGTTAAACTCGCTGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTTC CTTCATCTGGACCAGAAACCCAACGCCATGCATCTGCTATAAGAAGGAAGATTACGATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTCTATCAAA GAACCCTGGAAAGTCTGAGAAGGAGATGAATCGTCGCAAGGACACACTTCTAAATTTAAGATCGAAAGTGAACCAAATGGCTTCAACATTGAACATGTCT AACTTTGCAAACAGGGATAGTTTGCTTGGGCCAGATATAAAACCAGATGCAATGAGCAGAACCGTTGGCCTGGACAACAGTGGACTTGTTGGACTTCAAC GTCAAATTATGAAAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTAATAAGTACGAAACATATTGCACTGGCAGTGAATGAAGAACTGGGGTT ACACACGAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAGAAGAACTTGGCCGTTTTGAACAAACGTACA AAAGGTGGTTGCTCGTGCTTGTGCATGCTTTTATCGGTGGTTGGTATAGTTGTTTTGGTTCTTGTCATATGGCTGTTGGTCAAATATTTGTAATAATAAT GATAAACATGCCAACTCATTATGCTTCTGTCTTTGGAATTGGATGTATGCTTTCAAACATCATAACTTTGTTTCATTTTTATTCGTCGAATTTGAAGGTT TTATCACTTTTATGTCTGTGTGGTCTTGTAAATGTAAAGTATGAAATCGGAAGTGACCCGTTAATGCCTACTTATAATAACAATCGATTCCGCTGGGATG GGAGAATAGTCAAAATACTTGTGCTATGTACTTTGTATTTATCCTAAAATTATAAGTTATATTATATAAAAATGAGGATCATTAG
• Tissue: pods
• Gene name: LI_gene_146966;
• Additional information: details;

Expression of Ll_transcript_315038

FPKM

• PAB: 0.8
• PNAB: 0.1
• PS1: 0.4
• PS2: 0.1
• PS3: 0.2
• PW1: 0
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315038

• Blastp: Syntaxin-51 from Arabidopsis with 74.14% of identity
• Blastx: Syntaxin-51 from Arabidopsis with 74.41% of identity
• Eggnog: syntaxin(ENOG410ZZA3)
• Kegg: Link to kegg annotations (AT1G16240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426307.1)
• Pfam: SNARE domain (PF05739.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;