| Id Trinity | TRINITY_DN46759_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_315033 |
| Sequence | GAAGAAATGAAAATGAAAAGGTTTGAAGATATTTTAATATGAATTTGAGAGAAGATATTTTGATTATATATGAATTGATTGATATGAAATTTGGGAAGTT GTTAGGAAATAGTTATGGAAAGAAGTTGCAAAAGAGAGAATAATATAAAATAGAGATGGAAGTTGGGCCGAAAGCCCAGTTTGTTGTGAATGATAGAATT GGAAACGTGGTTCCCTATAAGCAATGACACAATCCTGAGATCTCTACACCTTTCATCAACAACTTCACAACTCAGAGGTATTCCAACATTTTGATTTTAC CAATTCCTTCAAAATATGTTTTATCATTTTCATTTTACCTTTCTTCAATTCCTTCAATATATCTTTTATCATTTTCATTTTACCTTTTTCAATTCCTTCA TCAAAAACGACGCCGTGCTTTCATAGACGACCACGCGCTCAGACGCTTTCATCCACCGCCGTACGCTATCATCGCGATCTTCCTCAAACGACGTCGTTAT TCACAAACTTATTTTCCTCAAAATCAATAGGTACAGTTTTATTCCCCTTACGATCCTTTCCTTTTTTTTCAATCTTATTGGACTTGTTTTCAATTTCCTT CAAAATTGTTATTCTGAGATGCTAGGTGAACGTTAATTCGCCAGAACTACGTGTTTTCTCTGTCTGAGAGAATTATGTATTTTTTGGCTGATGCTGAGAA TTTTTTGTTTTTTCGTTGTTACGCCTCTTTGATCTTCAGCTTAAAGGACTCTTTGTACTGTTTCTTTTCTGATTTCATTATTCACTTATTTTGCAAATTG TTGTCAATTTTGTGCTTCACATCAAATTTGGTTTCGGCTTTGATAATAGGAAACTCTTGTTGAGTCAATTAAGTGGTGAAGATCATTGTTACGTGGTTCA CCTACTGTTTCCGGTTATACGTGGTTCGTCATTTTTATATGACTTATTTCATAAAGAATCCGGTATGTGGTATGTAGGCTAAACGAGGGAACCAAGTAAC TGGCTAAGATAATGATGGAAGATGAAGTTTCAGTGGGCTAATTAAGAATCATGTGAATGATGTTTTTGGCTAGCTGGAATAGTTTTAACGGAAAAGTTAG CGCTGTGGTTAGTATTCATCCGTGAGAGACAGAAGTAGCCTGTGACGACGATGTTTACATAATAAATTCCTTCATTGTTAGTGATGATAAAATCAGTGGA AGTATTGTCTTAAGGAGTGGACGAGAATCTTCTGAATATTTGTATTTTTGTTCTTTGATTTCAAACTTTGGCTGTTTTCGTTTTACTGAGTGTTTAAATG CTTAAGCGAGCAGGAGATTCCATCCTGTGGAAGGAGAGAAGCCTGGTTGTGGTTTTGTTAATTTGTGAGATGTATATAGGAGCTACTCGTTTTAGTTTTT TTCTTCTTTTCGAATTTAAATATAGAAGAAATCGGGGAGAGCATTTTTTAGGCTTATTTATTATGTAATTTATATGTGAAAATAAATATATATGTATATA CGTACCTGTACTCTACATTTTCGGAATATAGTGTACCCCATGCCCGGTACTACCACGTATCCTTGTCGTTGCAAAACTACTATAAATCACCATTTGTCTT TGGGGTTCTTAATTTATCATATATTTTCTTTCTTTCAGTTATTTTCAGGCCAATGGCATCTTCTTCAGACGCATGGATGAAGGAATACAATGAAGCAGTT AAACTCGCTGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTTCCTTCATCTGGACCAGAAACCCAACGCCATGCATCTGCTATAAGAAGGAAGA TTACGATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTCTATCAAAGAACCCTGGAAAGTCTGAGAAGGAGATGAATCGTCGCAAGGACACACTTCT AAATTTAAGATCGAAAGTGAACCAAATGGCTTCAACATTGAACATGTCTAACTTTGCAAACAGGGATAGTTTGCTTGGGCCAGATATAAAACCAGATGCA ATGAGCAGAACCGTTGGCCTGGACAACAGTGGACTTGTTGGACTTCAACGTCAAATTATGAAAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAGACTG TAATAAGTACGAAACATATTGCACTGGCAGTGAATGAAGAACTGGGGTTACACACGAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTC TCGGCTGAGGCGAGTGCAGAAGAACTTGGCCGTTTTGAACAAACGTACAAAAGGTGGTTGCTCGTGCTTGTGCATGCTTTTATCGGTGGTTGGTATAGTT GTTTTGGTTCTTGTCATATGGCTGTTGGTCAAATATTTGTAATAATAATGATAAACATGCCAACTCATTATGCTTCTGTCTTTGGAATTGGATGTATGCT TTCAAACATCATAACTTTGTTTCATTTTTATTCGTCGAATTTGAAGGTTTTATCACTTTTATGTCTGTGTGGTCTTGTAAATGTAAAGTATGAAATCGGA AGTGACCCGTTAATGCCTACTTATAATAACAATCGATTCCGCTGGGATGGGAGAATAGTCAAAATACTTGTGCTATGTACTTTGTATTTATCCTAAAATT ATAAGTTATATTATATAAAAATGAGGATCATTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_146966; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315033
| Blastp | Syntaxin-51 from Arabidopsis with 74.14% of identity |
|---|---|
| Blastx | Syntaxin-51 from Arabidopsis with 74.41% of identity |
| Eggnog | syntaxin(ENOG410ZZA3) |
| Kegg | Link to kegg annotations (AT1G16240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426307.1) |
| Pfam | SNARE domain (PF05739.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |