Ll_transcript_315039

• Id Trinity: TRINITY_DN46759_c1_g3_i1
• Name Transcript: Ll_transcript_315039
• Sequence: GGGATATTAAAAAACATATGAGTCAAGGAGATAATTCAAGATCATTCAAAACCTATCCTATTTTAATATGGCAATTCAGTCCTTTGTCCTAATAAGGTTG TTTCTTTTACTTCAATTATTGGAGTTGTAATTCAATTCTCTATTTTTCAATTAAAACCATGACAGCTTGGTAGACGACAGCGCGGTCAAACCAACAGGGC GGTTGCTTCTACCGCCGTAGGTTATTCTCCACACATCACGATCTTCCTCAAACGACACCGTTTCTTTCACCCACATCCATAACCCTCTTCACAAACTTAG TTCCCCCAAAACCAAAAGGCTAATGGCATCTTCTTTAGACTCGTGGACGAAGGAATACAATGAAGCAGTTAAACTCGCTGATGATATCAATGGCATGATT TCTGAGCGGAGTTCCTTTCCTGCATCTGGACCAGAAACCCAGCGTCATTCATCTGCTATAAGAAGAAAGATTACGATATTAGGGACCAGACTCGACAGCT TGCAGTCCCTTTTATCAAGGAACCCTGGAAAATCCGAGAAGGAGTTTAATCGTCGCAAAGACACTCTTTCAAATTTAAGATCAAAAGTCAACCAAATGGC TTCCACATTGAGCATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGATACAAAATCAGATGCAATGAGCAGAACCGTTGGCCTGGACAACAGT GGACTTGTTGGACTTCAACGGCAAATTATGAAAGAGCAAGATGAGGGACTTGAAAAGTTGGAGGAGACTGTGAATAGTACTAAACATATTGCGCTGGCAG TGAATGAAGAGCTGGGTTTACACACTAGGCTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGACTGAGGCGAGTGCAAAAGAACTTGGC AGTTTTGAACAAACGCACCCAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCGGTGATTGGAATAGTTGTTTTGGTTGTTGTGATATGGCTGTTGGTC AAATATTTGTAATCATCTTATAGAAGGTGAGCCTCTGTGTAACGATAAGGTTGTCGCTTAATGATTATGAGGTCACAGGTTCAAATTATAGAAACAATGT CTTTGCTTTATGGTCTCGGATTGCTTACATTTATCATTACTAGACTTTACTAAGTGGACATCTCATCTTTTGAGCTATCTTGGTTTCATAAAATTATCAA GTCATGAAGCTTCTCTCCTATTTTGATGTGTGCAAACATCATGTTGTGCTTTGCTAATGACACTGGACTTATTGAAGTATTGAAAAGATTTGTATCATAA TTGTCAGATTTTATGTGTTTATATCTTTGCCTGATAGTATGAAAGTTGAAATGACTTCTTCGTTAATGGCTAGTCATTATAATTGATTTTGGCTGTGGGG ATTATTTCAAA
• Tissue: pods
• Gene name: LI_gene_146968;
• Additional information: details;

Expression of Ll_transcript_315039

FPKM

• PAB: 46.7
• PNAB: 41.2
• PS1: 41.9
• PS2: 21.7
• PS3: 34.3
• PW1: 37.3
• PW2: 44
• PW3: 36.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315039

• Blastp: Syntaxin-51 from Arabidopsis with 71.98% of identity
• Blastx: Syntaxin-51 from Arabidopsis with 71.56% of identity
• Eggnog: syntaxin(ENOG410ZZA3)
• Kegg: Link to kegg annotations (AT1G16240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417968.1)
• Pfam: SNARE domain (PF05739.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;