Id Trinity | TRINITY_DN46763_c2_g2_i1 |
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Name Transcript | Ll_transcript_314329 |
Sequence | CTCCATAATGCCATAACATCTTCATATCCATAATAAAAAACTCACTCTTCCATCTTCTTCTTTTTCACACACACTCTCTCTCCATTCTCCACCATGCACC CAGTTACTGGTTCCATAACTCTCCACTCTTCACTATGCACATTCTCTTCTGATAAACCATCATCATCATCATCATCATCACCACCTTCTTCTAAATCAAC CAACAATCTCTATGTTGCTTCCAAACCCAAAACTCTTCTCCAAAACCACCCACTTTATACACCCATCAATGCAAAACTCTCCATTCAATTCAAAGAAAAA ATCTTGTGTCTTGAGATTTTGGGCATTGATGCAGGTAAAGCATTGTCACAAAACCTTGAACTTCATGCAGCTACATTGGAATCCATTCACTCCATTATCT CATTCCTTCTATCCAAAGGTATCCATCAAAAGGACTTGCCTAGGATATTTGGCATGTGTCCAAAGATTCTAACTTCAAATATCAAAACTGATCTTAACCC AGTTTTTGATTTTCTGTTACAAGAACTTAATGTTCCAGATCATAGCTTTAGAAGGGTTGTTAAGAAGAACCCAAGATTGCTTACTTCAAGTGTTATGGAT CAGCTTAAGCCAGCTTTGTTCTATCTTAAGAGACTTGGGTTCAAGGATTTGGATGCATTGGCTTATCAAGATTCTATTTTGTTGGTGTCTAATGTAGAAG GGACTCTTATTCCTAAGCTCAAGTATTTGGAAAGTTTGGGATTTTCTAAAGATGAGGCTAGGATTATGGTGTTGAGATGTCCATCATTGTTCACTTTCAG CATTGAAAATAATTTTCAGCCAAAGTTTGAGTATTTTTCTGTGGAAATGGGTGGAAAATTGGAGGAGCTGAAAGAGTTTCCTCAGTACTTTGCTTTTAGT TTGGAGAAAAGAATAAAGCCTAGACACTTGGAAGTTGTGCAAAGTGGAATTCAGTTACCTTTGTCACTGATGCTTAAAAGTACTGATGAAGCATTTGAGG AACTGTTAAAGCAAGGAGGTGGATGATTATGGTTGCAGCATTATTTTCTATGTATTTATTTATGTAAATGCATACCATTCCAAGGAATTATGAACTTTGA TAATGTGTTCATAAGGTGTGTTTTCAAATTCCTTAGTACATGCTCCTAAAGTGACATAACTGAAATTGTTGAGTTCCTGTTGTAAATCTTTTGCTGTCTT TTAATGTTTATATTGATAATGTCAATCCTGAAAACTTTCCAGTGGAAAGCAAATAAAGGTGAAATGTAATGTTACTATCAACAAGTTTTTGTAATTTCAT ATTTTTCAATGAAACTTCGAAAGGCAACTTCTGCAAGAATGGAAATTTGATAAATTCTCAGATAAAAGTTAAACAATGAAGTAATTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_147001; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314329
Blastp | Transcription termination factor MTEF1, chloroplastic from Arabidopsis with 45.68% of identity |
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Blastx | Transcription termination factor MTEF1, chloroplastic from Arabidopsis with 46.03% of identity |
Eggnog | mitochondrial transcription termination(ENOG410XT49) |
Kegg | Link to kegg annotations (AT2G03050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417190.1) |
Pfam | mTERF (PF02536.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |