Id Trinity | TRINITY_DN46763_c3_g1_i2 |
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Name Transcript | Ll_transcript_314337 |
Sequence | CTAAACACACGCAGAAAAGAGATATAAACGAAAGAAAGAGTCATAGTTTTTGCTTATTGTTGTTCTTCATGCCACCACTAGTAGCAAGTAGGAATCCCAA ATCTTCCGAATTTGATTTTTCCCACATTCAAAAACACATTAAATTCTGATCATTTTATTGGGAAACGGAAATTAAGGAGTCTCTTCCCTTTTTGTGGGTC GGATCTTGTACTTATAGAGCTGTCACATCTCAAATTCTCTTCGCATCATCATCATCACCACCTTCTTATATTCAAACAAACTTTGTGATCTCAATTTTGT GTCTTCCTCAAATCTCAACCTTCACCATTTGTTGCACCCAATCATGGAATGTTTATTTCCCTTGCAGATTTGAGGTATGTATTTATGTCATATAGTTCTA AAAATTTGATCTTTTTTACTTTGTTGGGTATATAAATAAATATAAACATATTTGGATTAGATATTCATATTCATCAATAATACTATGGAGGAGAGGAATT TTGTGTGCAAGTATTGTAGCAAGAGGTTTCCTTGTGGGAAGAGTTTAGGTGGTCACATAAGGACTCATATTACTGAAGAAAGGAACAACAATAAGAATAA TAATAGTAATGGTGCTGAATGTGATAATCTGAACTTTGATGCTGCTGTTAGAAGGAAAAAGAAGAGAGATTTGTGGAGTGAAGATGGTTATGGATTAAGA GAAAACCCAAAGAAAACAATGAGGTCTGTGAATTCCAATGGCACTTTGGAACAAGAAGAGGAGGTGGTGGAGAAGTTCTGCAAAGAATGTGGAAAAGGGT TCTCATCATTGAAAGCACTTTGTGGCCACATGGCTTGTCATTCTCAGAAGCAGAAGAAATTGGTTTTGGATAGTGAATCTGATACTGAGGAGATTTGTGA TGTTCCAAAGAGTCCAAGGAGATCCAAGAGAATGAGGTTTAAGACCATTAGCCTTGGCAATAATCAGAGTTATTCTTCTTCTGTTCCTTTGGTAAATGGT TCTTCTTCTGTGTCAGAGGTGGAACAGGAGCAAGAAGAGGTTGCAAGGTGTTTGATGTTGTTGTCCAAAGATTCTAGCCATAAGGGTCCTTTTGCTTTGG TTAATGAATCTTCTGAAAACAACTCGGTTATTGTTGAGGCAGAAAAATCAGCACCTGTTGATATGAGGATTTGTATAAAGAATGGTAACAAGTTTGTCTC TAATGGTTATGATCCTGTGGAGGACAAGGTGCTGAAGTTAAAGTCTACTGATAACTCAGATTCTGGATATTACAGACATGGTCCTAAAACCAAAATGGCA AAAACAGATGTTTCAAATGATGAATTTAAGTCCGAGTATGAAAATTACAATGTCGAATCGAGGAAGATGCTGAACATGAATAAAGGGGTTAGCAAATACA CTGTAACTTCATTTAAGAAATCAGTGAAGGAGGATTTGGATTATGACAGAACAAATGGTACTACAAGGGAGCTTGATTCTAAAAAGATAGCCAATTATGA TTATTTTGAGCATAGCAAGAAGGACACAGAATATAGTTTTGGCAATGATGAAATCTATGAGACTGATGGAAAAGGATGGAAGTATGAAAGTTTGGCTTAT GATTCAACAGATGAGAGTGATGAAAGCAGCTCAGACACTGATTCTTTCCCTGTTCCAAAGCCTCATAGCAAGAATGTTTTCAATGGAAAGAACACTAGCA AGGCTAAGAAGAAGTTGAAGTCAAAGAAAAGCAAGGAATTTGAGTGTCCAATCTGCTACAAGATTTTCAAGTCAGGACAAGCCTTAGGAGGTCACAAAAG ATCTCATTTTGTTGGAGGTTCTGAAGAAAGCTCTGTGGTCATAAACCAAGGTCTTTGCCTTATTGATCTCAATCTACCAGCTCCTGTTGATGAATAAAAA ATGGGCATTCTTGGTTTTGCATCATTTTGAAGCATCATGCATACATGGAATTCTGAAAGTGTTTGTCTTTATCTATATGATGAAAGAAAAGCAATTGCAA TGTACAGCCATGTGGGTGGTAAATGGTTTTTGTTCTAAACTCCTTTTATCTTTTATTTGTTAGGAAATAGTTGTTTCATTTTCATGTTAATGGAACATGG CAATTTGGTACTATCTCAATTGATATTTTTGTTTCTTCTTATATCCAAGAATGTTATGAGAATTCCATTCCTTTGCTGCAAATAATATGTTAAGCCTTC BLAST |
Tissue | pods |
Gene name | LI_gene_147003; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314337
Blastp | Zinc finger protein ZAT1 from Arabidopsis with 56.9% of identity |
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Blastx | Zinc finger protein ZAT1 from Arabidopsis with 56.9% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT1G02030) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422944.1) |
Pfam | C2H2-type zinc finger (PF13912.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |