Ll_transcript_314344

• Id Trinity: TRINITY_DN46763_c3_g1_i3
• Name Transcript: Ll_transcript_314344
• Sequence: CTAAACACACGCAGAAAAGAGATATAAACGAAAGAAAGAGTCATAGTTTTTGCTTATTGTTGTTCTTCATGCCACCACTAGTAGCAAGTAGGAATCCCAA ATCTTCCGAATTTGATTTTTCCCACATTCAAAAACACATTAAATTCTGATCATTTTATTGGGAAACGGAAATTAAGGAGTCTCTTCCCTTTTTGTGGGTC GGATCTTGTACTTATAGAGCTGTCACATCTCAAATTCTCTTCGCATCATCATCATCACCACCTTCTTATATTCAAACAAACTTTGTGATCTCAATTTTGT GTCTTCCTCAAATCTCAACCTTCACCATTTGTTGCACCCAATCATGGAATGTTTATTTCCCTTGCAGATTTGAGATATTCATATTCATCAATAATACTAT GGAGGAGAGGAATTTTGTGTGCAAGTATTGTAGCAAGAGGTTTCCTTGTGGGAAGAGTTTAGGTGGTCACATAAGGACTCATATTACTGAAGAAAGGAAC AACAATAAGAATAATAATAGTAATGGTGCTGAATGTGATAATCTGAACTTTGATGCTGCTGTTAGAAGGAAAAAGAAGAGAGATTTGTGGAGTGAAGATG GTTATGGATTAAGAGAAAACCCAAAGAAAACAATGAGGTCTGTGAATTCCAATGGCACTTTGGAACAAGAAGAGGAGGTGGTGGAGAAGTTCTGCAAAGA ATGTGGAAAAGGGTTCTCATCATTGAAAGCACTTTGTGGCCACATGGCTTGTCATTCTCAGAAGCAGAAGAAATTGGTTTTGGATAGTGAATCTGATACT GAGGAGATTTGTGATGTTCCAAAGAGTCCAAGGAGATCCAAGAGAATGAGGTTTAAGACCATTAGCCTTGGCAATAATCAGAGTTATTCTTCTTCTGTTC CTTTGGTAAATGGTTCTTCTTCTGTGTCAGAGGTGGAACAGGAGCAAGAAGAGGTTGCAAGGTGTTTGATGTTGTTGTCCAAAGATTCTAGCCATAAGGG TCCTTTTGCTTTGGTTAATGAATCTTCTGAAAACAACTCGGTTATTGTTGAGGCAGAAAAATCAGCACCTGTTGATATGAGGATTTGTATAAAGAATGGT AACAAGTTTGTCTCTAATGGTTATGATCCTGTGGAGGACAAGGTGCTGAAGTTAAAGTCTACTGATAACTCAGATTCTGGATATTACAGACATGGTCCTA AAACCAAAATGGCAAAAACAGATGTTTCAAATGATGAATTTAAGTCCGAGTATGAAAATTACAATGTCGAATCGAGGAAGATGCTGAACATGAATAAAGG GGTTAGCAAATACACTGTAACTTCATTTAAGAAATCAGTGAAGGAGGATTTGGATTATGACAGAACAAATGGTACTACAAGGGAGCTTGATTCTAAAAAG ATAGCCAATTATGATTATTTTGAGCATAGCAAGAAGGACACAGAATATAGTTTTGGCAATGATGAAATCTATGAGACTGATGGAAAAGGATGGAAGTATG AAAGTTTGGCTTATGATTCAACAGATGAGAGTGATGAAAGCAGCTCAGACACTGATTCTTTCCCTGTTCCAAAGCCTCATAGCAAGAATGTTTTCAATGG AAAGAACACTAGCAAGGCTAAGAAGAAGTTGAAGTCAAAGAAAAGCAAGGAATTTGAGTGTCCAATCTGCTACAAGATTTTCAAGTCAGGACAAGCCTTA GGAGGTCACAAAAGATCTCATTTTGTTGGAGGTTCTGAAGAAAGCTCTGTGGTCATAAACCAAGGTCTTTGCCTTATTGATCTCAATCTACCAGCTCCTG TTGATGAATAAAAAATGGGCATTCTTGGTTTTGCATCATTTTGAAGCATCATGCATACATGGAATTCTGAAAGTGTTTGTCTTTATCTATATGATGAAAG AAAAGCAATTGCAATGTACAGCCATGTGGGTGGTAAATGGTTTTTGTTCTAAACTCCTTTTATCTTTTATTTGTTAGGAAATAGTTGTTTCATTTTCATG TTAATGGAACATGGCAATTTGGTACTATCTCAATTGATATTTTTGTTTCTTCTTATATCCAAGAATGTTATGAGAATTCCATTCCTTTGCTGCAAATAAT ATGTTAAGCCTTC
• Tissue: pods
• Gene name: LI_gene_147003;
• Additional information: details;

Expression of Ll_transcript_314344

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 2
• PS2: 1.2
• PS3: 1.3
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314344

• Blastp: Zinc finger protein ZAT1 from Arabidopsis with 56.9% of identity
• Blastx: Zinc finger protein ZAT1 from Arabidopsis with 56.9% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G02030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422944.1)
• Pfam: C2H2-type zinc finger (PF13912.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;