| Id Trinity | TRINITY_DN46764_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_314604 |
| Sequence | GGGTAATGAAAAGGGCAAAACGGTAATTGAACTCTCCAACACCATCATTTGCCGGATATATAGCTCCGTAATATCAACGCTACTCTACATACATATAGCA CCGCAGCTAAAAGTGATTTTCTCCGCAAACAAAGTCCCAAATTTTCTCCAGAAAAAAAATAAAAAAATCCATAGCTTTCAGATTTTAGCTTAATCTTCAT TCAACATGTCTTGGCAAACTTACGTCGATGAACACCTTCTGTGTGACATCGAAGGTAATCAACTCACTTCTGCTGCTATCATCGGCCAAGACGGTAGCGT TTGGGCCCAAAGCACCAATTTCCCACAGTTCAAGCCTGAGGAAATAGCTGCTATAGTGAATGACTTTGCTGAGCCTGGATCACTTGCTCCAACTGGATTG TACCTTGGTGGCACAAAATATATGGTTATCCAAGGTGAGCCTGGAGCTGTCATTCGAGGGAAGAAGGTAATGACTGTTCATGATCTTCGCTTGAACTATG ATATATAGATGTGTGGATAATGTAATGATCATAGTAATGCAGTTTCTTTGATAATATCAATTTCCAGTATTTTTCTCTTAATTTTATGCATTACTATTAG AATCATGATTCAGCGCAATGGTAAGTTTTCACTCTTAGTGACCAAGAGGTCACATATTCAAATCCTAGAAATAGCTTTTCCGCCTGCAAGGTAAAACCGT GTACATCTACTCTTCCCATATCCTACTAGGTGATATTCCGAGAAAGAAATATCCCTTTTTCGAAACCTACACTAATTTGGAATCCATCTGATGTAAAACT TTTGCTTTTTCATGTATATGTGGATTGATCTAGATCTTTTGTTGCATACTGTCACCTATGAAGCATGGATACTTCAATATCCTTCATGTATTTGATACTG ATAATCTCAGATACTTAAATTGATATGTATCCATGGAGTATTGAAATTATTTTTTAATAAATCAATTATAAATCCGATATTTTTCGGATACTCTATGGTA CTCTTCAAATGATTTTTTTCCTCTCTAGATACCTGAACTTCCACATGGAATCATTTTAAGAGAGAAAAATACAACATACAGTCAATAAAATAGAAGAGAG AAAGATAGCTTTTAATCTACTATACTGAATTGTGGAGAGAAAAGATAAAGCATGTGTATTCCGTAGAGAAGGAAGAAGAAATGGATCTGCATATTGATGA TAATCCATACTATTCTTATTTTTGTGAAATAAGCATTGATTCTTTATGACGGTATGATTTTCGTTTTATATTTAGTGGTCTCTATGAAGTATGCTCTTAA TCCGGAATTTCAGCGCAACAATCATATGTTCATTATGTTTTATAAATTTTATGCGCATATTCTAATATTCTATTCATTTATCTCCAATGTATTGAATCCT ATACTTTTCATGAATATGCGTATCAATGTATCGGATACATATTCTATCCAATGCTCGTATTCATATCGGTACTTCATAGACTATCACTGCAGCTCTCTAC AACAGTGATCAATCTTATGAGATTGGTCAATACGCAAAAGGATTATCTGGTGATAATTAGTCAATTCGGCATAAGATTGGTCAATTTTCTGGCTGCATAG ATCTGTAGAGAATGTATGCTATGGAGGATCCAAGTTAGTCTGTGCATTGCTTATCAATATGTAAACATATACTCAGACTTACATAGAAGCCTTCATGCAT ACTCAGATTGATGTAAAGCATTCCTTAAATTTTAAGTTCGATATCTCCCAAATTTTGATTTAGTGGTGAAAACTTGAACATATATCAGAAGGGTTTCTTG CTCAATATCTTGTGCATATATTTTCTTCATGCTTATTATGCTCATTATAGTTGTAATGTCAACCTTTCCTCCTATTATCTTCCAGGGTCCCGGAGGTGTT ACTGTCAAGAAGACCAATCTGGCATTGATCATTGGCATTTACGATGAACCAATGACTCCTGGTCAGTGCAACGTGGTAGTTGAAAGGCTTGGAGATTATC TCGTTGATCAGGGTCTCTGATCCTTTTGGTTATGTCTTGTTATGGTGCATATTTCATTGGCTTCTTTACAAGGATTTTGTGTCGACTCTTAATGGGAATG CTTGATTTCAGTGTAATAACGGTATGAGTATCAAAAGTCATGTGGCAAAGAAGTGTTTGGTGCTTGAAAATGATGACCATCTATGTTTGTACTTTTTTTA GTGGGGTATATGTATACATTAAAATGGTTTTAACTTTTAAACTTTAATGCTGTGGTTTAAGGGATGGCGTATCCATAAAAGATTCGCAGATTCTTATCTA TCTGGCAGAGAGTGTTCATATTTACTTATACCTTCAATAGGCTCCAATTTTTTTTCCTCATTTTCTAATGCAAATTTTTTCCCTCAACATGTCACAACTG GTTTTAGTACCTGTTTTTCCTATCTCAATATTCATACTCCAAGGCTACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_147011; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314604
| Blastp | Profilin-1 from Soja with 90.8% of identity |
|---|---|
| Blastx | Profilin-1 from Soja with 90.8% of identity |
| Eggnog | Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (By(ENOG41126PD) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002491) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431556.1) |
| Pfam | Profilin (PF00235.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |