Ll_transcript_316668

• Id Trinity: TRINITY_DN46765_c0_g1_i6
• Name Transcript: Ll_transcript_316668
• Sequence: AAATTTTCCTCAAATTCCTCAAACTCCAACAAAAATCATTGTCAAAAGCTTTCAAAACCCTTACTCTGTCATTGTGCCCCTCCAAGCCATTTTTTCATTC CTTACGTCGTTTCAATTCAGAAGAACGACGAGTAAACCCTAACGATTTTGAAATCGTCGAGTTTCGATTTTAACCTCTTTACTCTTCTATTCATACCTCA TTATCTTCTGGGTCGTGTTTTGTTTTGAGTGCAATGGTCACTGGTTCAAGAATGGAAGTTGTGAGTGGCACACAAATATTCTCTGCTAAAGTTCGCAAAA CCATTCAATCCATCAAAGAAATCGTGGGTAATCATTCTGATGCTGATATCTATGTTGCCCTCAAGGAAACTAACATGGATCCTAATGAAACTACTCAGAA ATTGCTCTTCCAAGATCCATTCCATGAGGTGAAGAGGAGGAGAGAACGAAAGAAGGAGCCTCAGAATCAGAATGTTGGGACTAAGAGCTCAGCTGAGCGG TCTGAGCCACGAAGACATTCTGAGAGTGTTGGTCAAGGAATGAAATTTCATGCCCCTTATGAACGTAATTTTCGAAGAGCAAATTACTCTCGAAATACTT TACCTGATCCATTCCATGAGGTGAAGAGGAGGAGAGAACGAAAGAAGGAGCCTCAGAATCAGAATGTTGGGACTAAGAGCTCAGCTGAGCGGTCTGAGCC ACGAAGACATTCTGAGAGTGTTGGTCAAGGAATGAAATTTCATGCCCCTTATGAACGTAATTTTCGAAGAGCAAATTACTCTCGAAATACTTTACCTGGC AATGGTCGAGAGTTCCGTGTTGTCAGAGACAACAGAGTAAATCACATATATAAAGAAGTAAAGCCTCCTTCACTGCAATGCTCTACATCCGCCAATGAGC AGTCAAATGCAAACACATCTGATAAGGGCCCAACAACAGCTGCTACCTATCAAAGGTCATCCGGTGTTAAGAATTCATCTCAAGCTCTTAATGGTCCTTC TGACTCACATGCTAGAAGCTCTAAAGATGTTGTTTCAAATGCCAGTGACAGAAAATTTGCATCCGACGGGAAGCAGAGTGTTCTCTTGAATGCAGCAGCA AGAGTGCAGTCAATTAAGCCTGATAGCACCCACCAAAATTCTACAACTGTGGCTTCGACTAGTTCTACTGTTGGGGTGTATTCCTCTTCAACTGATCCAG TTCATGTTCCCTCTCCTGATTCCAGAGCATCCAGTGTTGTTGGGGCCATTAGGCGGGAAGTGGGTGTTGTTGGTGTTCGGCGACAGTCTTCAGACAACAA AGTGAAACACTCATCTGCTCCCAGTAATTCTTCTACTAACTCTCATATTGGAAAAGCTGGTACACTTGCAAATTCATTTCAATCTGTTGGTGCTCTCTCA AAGACTGAACAAATTACTCAAACTAATGTAAATGAAACTTCATTCTCTGGCATGTCAGTTAGCAGGCCGTCCATGAACAACCAACATAATAGTAGGCCAC ATCAACCTGTGGGGCATCAGAGAGCTTCCCAGCATAATAAAGAGTGGAAACCTAAATCAAGCAAGAAGTCGAGCAGTAACAGTCCTGGAGTGATTGGTAA ACCTAAAAAAACTGCTTCACCTACAGCTAAAAATTCTAGAGATATAGAATCAAATACAGCAGAGCTTCAAGAGAAACTTTCCCAAGTTAATATATATGAG AACAAAAATGTGATCATCGCACAACATATTCGAGTTCCAGAGACTGAGCGCTGTCGGCTGACATTTGGTACCATTGGGACAGAAATTGACTCTTCGAGGC TTCAATCTGAGCATCAATTAACAGAAGCTTCTGAAAAATCAAATGAGGAATCTACTTCGAGATTGGCAGTACCTCCTCCAGAGCTGTCCACTGATGATGT TTCTGGGAGCAAACAGGTTGACTTACAGGAGGATCACGTTAGAAGAACTGAGTCAGTCTCTCCAGCATCTGATGCTACTGCTGAGCAACTATTGCCTGAC AAAAAAGTCTCCTCAACTCCTCAGAATCTCGAAAATTATGATAATATTGGATTAGTACGTGATAACGTTCCGTCCTATTCACCGTCAGAGTCAAACCAGC AAGATTCACATGATATGCCAGGCTTCTCGGCATATGATCCTCCTACTGGTAATGAAGTTCCTTATTTCAGACCCACAGTGGATGAATCTGTACGAGGGCA AGCTCTGCCATCTCCGCATGAGGGTTTGAGCTCCCATGGAGCCAATAGCATTCATGCGTCCCCAATACCCTTGATTCAACAACAGCAACCTCCTATTGCA CAGATTTATCCACCACTTCATGTTTCACATTATGCTAACCTTGTGCCTTATCGCCAGTTTCTGTCACCAGTCTATGTTCCACCTATGGGCATGCCCGGAT ATTCAAGTAATCATCCATATGTTCACCCATCAAGTGGAAGCAGTTACGTCTTGATGCCTGGAGGCGGTTCCCATCTTAATGCCAACAGCCTTAAATATGG AGTTCAACAGTTCAAGCCTGTTCCCACCGGAAATCCTGCAGGCTTTGGAAATTATGCTAATCCAACTGGGTATGCCATGATACCTCCTGGCGTGGTTGGT GCTGCAACAACTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAACCCTCAGGCTGAGACATCAGAAATCTGGTTGCAGAATC AAAGGGAAATTCCTGGCATGCAATCCACTCCATACTATAACATGCAAGGACAAGCAACTCATGCCGCTTACATGCCATCGCACACTGCTCATGCTTCCTT CAGTGCAGCTGCAGTTCAGTCTTCTCACATGCAGTTCCCCGGCATGTATCATGCTCCTCCGCAGCTGCTCCGGGAGCACAAGTTGGTGCATATCAGCAGC CCCAAATGGGTCACCTCAATTGGACAACAAATTTCTGAAGGAGAAAAAAGAAAGAGAAAGTGAATCTCTAACCCCTGTGTACAAGGGACTGAAGTAGATA TAGAAAATTCAATTTTCATGGTGAAATGAATATAAATATTATTTATTTTCTCTAATGCATTGAGGCATTTAATTTTCATTCTCAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_147017;
• Additional information: details;

Expression of Ll_transcript_316668

FPKM

• PAB: 0.2
• PNAB: 1.2
• PS1: 1.6
• PS2: 0.7
• PS3: 0
• PW1: 0.1
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316668

• Blastp: GBF-interacting protein 1-like from Arabidopsis with 56.9% of identity
• Blastx: GBF-interacting protein 1 from Arabidopsis with 46.77% of identity
• Eggnog: Protein of unknown function (DUF1296)(ENOG41104R4)
• Kegg: Link to kegg annotations (AT1G55820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461286.1)
• Pfam: Protein of unknown function (DUF1296) (PF06972.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;