| Id Trinity | TRINITY_DN46772_c2_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_316680 |
| Sequence | ACAAAAGAAAGAAATAATGCTCAATGATTTTAACTTACTATGTCTGGGATAGGGTTGCTTTCTCGATTTCACTCAGGTGCAAATCACATGGGCTTTTTCG GGGTGTTCATATGGTAGATTTGTAGAGAGATTGGCATGTTTTGATGCATGATCATTATGTGTAGGATCGTAGTTTTATTTTTATTTTTGTGAGGATTTCG TATCCTCCTTTTTTAACTATCCTCATTTCATCTAATACTATTTCTTTTCTATTAAAAAATGTATAATCACAAATAAGCTTGTCAAATATTTTCTCAAAAA CATACGTCTCTTTACTTATATGCAGGCATGTCTTGAACTTTTATCACGAAGTGGTGTAAGTATAAAGGGAAAGAAGGCAGTTGTGGTTGGTAGAAGTAAC ATAGTTGGATTACCGGCTTCATTGCTGCTCTTGAAAGCAGATGCTACAGTTACCATTGTCCATTCACACACAAGTCAACCAGAAAGTATCATACGTGAAG CCGATATTGTTATTGCAGCAGCAGGACAGCCAATGATGGTTACTAGAAAAACCTAATTTACTTTATCCACATCTCTATTCTGAATCCTTGCACAGTTATT TTCAAGTTCCAAATTTTAGCCTTTGGAATTAAGACACTGATAGTAATAGTATAATGCATATAAGAATTAGCTTACTTCATGTTTTTCTCATAAAACCTCC CATCCTTGGTACACATGCAAATCTGTTAGATATACAATAGCTTTCAAATGTAATCGGTACTGTTTAACAGCATTTGTTAAACTCCAAGTTGATCTTCCTT TCATGACCAATATCTGTCTGCACACACAATACAAAGCCGAGAGTTTTCGGAAAATTCTAGGTGCAGGGCTTTGCATCCCATCAAGTAGCTATAGTTAATT TCAATCTTCTTCCTAATGCAGAGCTCATATTATTAGTATTTTTCTTTTTTAGATCAAGGGCAGTTGGATCAAGCCTGGAGCCGCGGTCATAGACGTCGGA ACAAATGCTATTGATGACCCAACAAAGAAGTCAGGTTACAAACTTGTTGGGGATGTAGATTTTGAGGAAGTATCTAAAGTTGCTGGTTGGATTACTCCTG TTCCTGGTGGAGTGGGTCCAATGACAGTCACAATGTTGCTGAAGAATACTTTGGATGGTGCCAAGCGCTACATCGAGAAGAATAACTGATCTTCCTTTAA TTTGAATAAAAAAGTTCTGAGAATCAGTTATATCCTCACTTCAGTTTCTGCTAAGGTTGATAGATGTGTTTTATATATAACAAGTTTCAGTTTTGGAACT AGATTAATGTTCTGATCTGATCAGAATTATATTTCGGCTCTTTCACTATCTCTAGATGCTTCTTTTTTGGTAATATCTCTTTCCTCCTCATAGATCTCAC AAGCTTTTCTATGTTTATTTGTTTTAAGGATGAAGCAGTAGATAATGGATATAGAAGAAGCAGTTTTTCTTGCATCTTTAGACAAGTTATGGTTTCCTTT GGTAATAATGGCTTGAGAAGAAAATGGAATCTAGCAATAAAAGAAGAGTAGAAGAAAATACTTTGATAATTTGTTTTTTGTTTTAATAGTGACAATGAGG TTTAAACGCATTGTGCAAACTACCTAAACCCTTCTTGGTTTAATTGCACTTAATATTTTTTTGTTTTAAAAAAGTGGGGTTAATTCAGTTTTAGCTTTTA ATCATCTTCCTTTAAGGAATTGGTGTAATTTGTGAAACAAAAAAATGCTAAATTGCTAATTACTAGTTACTTGAACCAAACATTGTATCAACCAACAAGG TATTGGTCTTGTTAAAGGTAAAAATGTAATTTGATCATAAATAAAAAGGATACAATTTACATTGTATCTTATCTTTTCTTTGACATTTTAGAGTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_147074; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_316680
| Blastp | - |
|---|---|
| Blastx | Bifunctional protein FolD 2 from Arabidopsis with 84.72% of identity |
| Eggnog | Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (By similarity)(COG0190) |
| Kegg | Link to kegg annotations (AT3G12290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440855.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |