Ll_transcript_314790

• Id Trinity: TRINITY_DN46773_c1_g1_i3
• Name Transcript: Ll_transcript_314790
• Sequence: TTTAGATTTATTTTGAGAAGAAAAGAAAAGAAAAAGAATAAAATAAAAAAGCGGCAGAATATGCTTTGCTCAACAGAGCAGATTATCCTTTCTCTCCTCT GTGCATTGCATCTTTTTTCTTCCTTCCTTCCTTTCAATCATTTCCTCCTCAATCCTTTAATCATTACTATTCTCTCTTTTTCTTTCACTTTCTAAATCAA CAGCCACCCTTACCCTTCTCTAACCTATAAAACCTTCCCCTGTTACTTCACCACAACACAAAGACCATGGAGCTTGTAACCGCAACCGATCTTGTAGTAA CTGCATCCCTCGCTCTTCTTCTCTCTTTCCTTATTGCTAAGCTCGTTTCCTTTGCCATCACCACTGATCCGAAAACAACACAAATTTATCAACTCAACCG GTTATGCCACGTGTCCGTGGAGAACAAGGTACACTTTCAAATTCCAACCAATATAGAAACTGATCATAACATAGATGACGGAGAAAATGAAGAGATCAAT GTTGAATCTAAGGCTTTTGAGTTGTCGGTGACGCCGGATATTGCAGTGGTGGAAGACTCTGACGTAGGAGAAGAGTTTGATTCTGAAGCTGCTGTTGTTG ACGTTGTTGGTTCTGATGATTCTGTTGCGGAACAGAGGAAAACCAATTTTGATTGTGTTAACCTGTTATCGAACGTGTCTGCTGAAAACAAGGTACAGTT TCAACTTCCAACCAATATAGAAACCGATGATAACGCACCCGGAGAGAGAAATGTTGAATCTAACGTTCTTGAATTGTCGGTGAAGCCGGACATTGCGGTG GTTGATGTCTCGGACGTAACGGAAGAGTTTGATTCTGAAGCTGCTGTTGTTGGTTCTGCTGATTCTGATGACGATTCTGTTTCGGAACAGAGGAAAAATG ATTATGATTGTGTTGAAGAAACCGGTGTCGAAAAACCGTCGTATGTGGAGGAGGAAGAAGAGAGGGATGTGGTTTTGGACGGTGATGATTGGGAAGGGGT TGAGAGGAGTGAATTAGAGAAAGTGTTTATGGCGGCTACGGAATTTGTTGTTGGTAGTGAAAGTGATCGGTTTGGTAGTGATGTAGAGAAGGAGTTGTAT GGGCTTCACAAGATTGCAACAGAAGGTCCTTGTCGTCAATCTCAGCCAATGCCTCTCATGTTCTCTGCACGTGCAAAGTGGGTTGAGAGCTGCTCTGCTT TGTATGAGTGATGGATAGTACTGATTACGTTGTGCAAGGAATGCTTGGCAAAAGCTGGGGAACATGAATCCAGAAGTTGCTATGGAGCAGTATATCAGCC TTGTTTCAGATAAAGTTCCTGGATGGATGAAAAATACTTCTGCTGGTATGAGTGAACATGAAGCCACAGGGTCAGAAATTCCGGAGAAAGTTGGTGCTGA TCTGAACACATCTTTTTTTCATCAACAAATGATGTTAACTGATAGGGAACTGGAACAAGAGAAAGAGTCTAGTGCTCAATACCATAGCCCACTCACTGAG CCAGATTTGGAGAACAATGTAAGATTGTAAAATCATTCTGACTGATTGCTTATATAACATCCATTCCAATTTGAGGTAGATGTTACTATGTGTTATTAAC AAATTGAAAAAATTAATTATGCTACTAAAGATATTACTGGTTGGGTCGCAGACTAGGCCGCTGTCTGGTACTGTAAAAAATTGTGAAAATAGACTATCAA TTATGACACCCCCATGATTAGAGAGTCCAACTCAGTGTATCGGATAACCACAGTCCTGTGAAAACCGCTTTAGAATTACACCCAAAATATAGCTAACGAC ATATATACCTATTGTTGTGGTTAATGCCAATCAACAATATGAGTATTCATACTTGACAGTATGGCTACTGCCACCTGACAACATAATACTGTCACTCAAC AATATGGCTATTGGCACTCAATAAAATAGTTAATTCCACTTAACAAGCAAGCCAATGCCACTTACACAATATGGGGAATGTTGTTCAGACAAAAGGTTGA TGTCTCTGAAAGATAAGGTTGTTACACCTAAAAGATAAAGTTGTCACCCCCTAGAAGATAAAGTTGTCGCCCCCTATAAGATAAAGTTGTCGCCCCTCAA AGGTTAGGCTCATACTCTCAAAGATACAGCGGATGCTGTCAAAGATAAGGCCAATGCTCTCAAAGATAAGGGAGATCCCCCTAAAGATAAGACCAATGCC CCTCGAAGATAAGATTGTTGCTCATCAAAAATAAGAGTGTCCACCTCAACTATAAGGTAGCTGCCACTAGGAGATAGGGCTGCTATTGCTAAATGAAAAG AAATGGGAAGAAGTTTATGGAATTGAAAAAAAACTGAAAGCCCAACATTGAGTAGCTTATACATTTAAAGTAGTTCTCAACTCTATAGATAGAGCCCTCC CTTTTTCACACTCGTCTATTAATAACATGCTAAATGAATATACATTTATAGGATGTACTTGCAAGTTTAGTTTTCTTATGGTTTGGGATCTAGACATAAG TTAGACAACCCCAAACTTAGTAAAAAAGACAAATTTGATTATTTATTCTTTATATCTTTTATAATTAGTTCTTTGATCAAACATCTCCATAGAAGCATTG CCCCGTTTTCTAGGTGCATTTTTGAAGATTATTAAGCATGTGATTGAATGTTATCAAAGAACAAATAAATAATATAGGATCACTTAATCTAATGATGTAA GGCCTCGTTAGATCACCAGATAACCAAAAGGTCAATAATTCGATTTCTGTGAGTGACACTTGTTGGGAGGGGCAACCATATACTCCAAAAAAGATTAGTT CCTTACCCAAAAGGATAAGGAGATACCTTTAATATTATAAAAAAAAAATACTTAATTATAATGAAACTGGGTATAATGCACTTTGAAAAATATTTCAGGC TTAAATCCTTAGTTATTTTATCCTCTTCACATTGTTATCCTTTTTCTAGGTCACTTAGATATCATTCTTTTAAAACAATGTCATATTTTTTTAATATTAA GATAAATATAATTATTTTATTTTATTTTTTTGTTGCCATGTTTTTAAGTGATACACCTCAAACCAAAAATATTTGTTTCGTATCAAAAGCAGAAAAAGAA CCACTAATATTTACGGTAAAAATGATATAAGAAAATATTTTAAAATTGTTGTTATCAAATTAAAAATATTCAATATCCCATCAAACATATTACTCCCTTA GTGGTGGATTAAATCACTCTCTTTAAGATGGTTCATGATACTAAAAAAAATTGTCCAAATAAACTATCAATAACAATGTATCCAAGATAAAACAACTCAT CTCACTGGATAACCACTTCACTATGAAAACTGTTCTAGATTTGCACCACAATTACTTTCATCACTCAATAACATGACTAATGCCAAACTTAATATATGAC TACTTTTATGGCACCCGCCACTGACAATATGGCTACTACCAATCAACAAAATAGACGATCACACTTAACACTTAACAAATTGGCTAATGTCACTCAAACA ATATGGCAAATGCTACCCAAATAAAAGGTTGATGTCTCTAAAAAAATAAGCGTGCTTCCCTCAAAGATAAGGTTGTCTCGAATATAAGGTTGTTGTACTT GAAAGATAAGGTTGATATAGCTGTTTAATGTTTTCTATGCTATGTTCTGTTTTTTCTTCCATTGCATTATTAGAATTATTTCAGTGTTTGAATTAGTGGA TTGTATACACGAGTTTTCTTAGCGTGGATACTTTCAGGTTAAGAAATGATGGCTTCTCTCTGTTTGTATTCCCCGCCATGAAACTTCTCCATCATCTACT TCAGGGAAAATAAGATTCGCTCCAAGAAATTTGCTTTCTCCTTTGTTCTTTGAAATCAAATGCTGATTATTAAGCGTTCTTAAATAACGAACTGTTATTA TGTATTACATAAATAAATGCTTGTATATATGATCTGATATGCTTCAGAATATTGCCTACTTTCAAATTGTTAAAACTAATTTCTTTAGTATCATCTCAAT CCTGTGGCTATTCCATTTAAATTTTGTTTCTTTATATTTCAACTATCATCTCC
• Tissue: pods
• Gene name: LI_gene_147087;
• Additional information: details;

Expression of Ll_transcript_314790

FPKM

• PAB: 2.6
• PNAB: 0.7
• PS1: 0.8
• PS2: 0.6
• PS3: 1.1
• PW1: 1.4
• PW2: 2.2
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314790

• Blastp: Acyl-CoA-binding domain-containing protein 3 from Arabidopsis with 49.49% of identity
• Blastx: Acyl-CoA-binding domain-containing protein 3 from Arabidopsis with 59.7% of identity
• Eggnog: Acyl-CoA binding domain containing(COG4281)
• Kegg: Link to kegg annotations (AT4G24230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429833.1)
• Pfam: Acyl CoA binding protein (PF00887.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;