Ll_transcript_315078

• Id Trinity: TRINITY_DN46777_c0_g1_i10
• Name Transcript: Ll_transcript_315078
• Sequence: GATCAACATACAAGTAATGAAACACGCAAACACATCATTTCCCCCTAATATGCATTGGATTTAGCAGAAAAAACTACAGAACAAAATATATAATAATATC ACTACTAAATAAACAAAAAGCTGGATCGACATGTCACTATTACAATGTATCAATTCTACACGGAAACCATGACGAGTAAGCTTATATGGGTAATCAATGT AGCTTCTCACATTCCGATTATAAATTCATCAATTCACAATCAACATTCCACAATTGCACCATCCATAAAATAACAAGAAACATAGTCCAAATCTCATTAA AAAGTTTGAGGCAAAAATGAAGTCTAAGGGATCCATTTTGATGAAGCTTGTGATTCTTCAGTACTTGGCAGTTCTCTGTTTTTCACAGGATTTTGATTTC TTCTACTTTGTTCAGCAGTGGCCAGGATCTTACTGTGACACACAGCGAAGTTGTTGTTACCCAACAACTGGAAAGCCTTCTGCCGATTTTGGCATTCATG GGCTTTGGCCTAATTACAAAGATGGCTCTTACCCTTCTAATTGTGATCCTAATAACCCTTTTCAGCCATCTCAGATATCAGACCTCATCAGTAGCTTACG GAGGAATTGGCCCACACTAGCATGCCCAAGTGGGAATGGGATACAATTCTGGACCCATGAATGGGAGAAACATGGAACATGTTCAGAATCAATCCTACGT AGCCAACATGATTATTTTGAATCAGCTCTTAACCTCAAGCAAAGAGCAAACCTCCTACAAGCTCTTACAAGTGCAGGAATACAACCTGATGGGGGGTCTT ATAGCTTGAGCAGCATTAATTCAGCAATAAAAGGTGCTATTGGGTACACTCCATTTATTCAGTGCAATGTGGACTCAACTAGTAACAGCCAACTTTACCA AGTTTACTTGTGTGTGAACACCAATGGGTCAGACTTCATCGAGTGTCCTGTGTTCCCTAGTGGCAGATGTGCTTCAGAAATTGAGTTCCCATCTTTCTAA TTCCATTGGATTAATCTACCCCTCCATGTTCATTTGATTAGTTTTGCTTACATTAATGTTATTGTATACATGTTACATTGTTCCATTGCTTTTTAGTTAC TTTCATATTCTAGTCCACTAGTACTTGTTATACCAATGTTACTCATCAATTGTACTTGTACTTCTTTCAATTGGTTTGTGCTTTATGGGACCTAATGTTT TCCTTGACCATTAGTTATATTACCAAAAGTGAAATTTTTTGACGCATTTGGATCACAAACTTTGTTACTCAATGTATAGAAGACAAATCCCATTAACTCA ATTAATAAC
• Tissue: pods
• Gene name: LI_gene_147103;
• Additional information: details;

Expression of Ll_transcript_315078

FPKM

• PAB: 473.4
• PNAB: 6
• PS1: 35.5
• PS2: 6.8
• PS3: 14.3
• PW1: 180.7
• PW2: 208.8
• PW3: 86.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315078

• Blastp: Extracellular ribonuclease LE from Lycopersicon with 68.64% of identity
• Blastx: Extracellular ribonuclease LE from Lycopersicon with 68.64% of identity
• Eggnog: ribonuclease T2 activity(ENOG4111M7G)
• Kegg: Link to kegg annotations (544098)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434081.1)
• Pfam: Ribonuclease T2 family (PF00445.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;