Ll_transcript_315079

• Id Trinity: TRINITY_DN46777_c0_g1_i11
• Name Transcript: Ll_transcript_315079
• Sequence: CACTATCCAACAACACAGTTCAGGAAGAAAAGAAAAAGAGGGGCAAAAAAATGGAGTTCAAAGGATGCAATTTGATTAAGCTTCTGCTGCTAACACAGTG CCTCATAGTTCTCTGTGCTTATGGTGAGGATGTTCATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAAGCAGAGTTGCTGTTAT CCTAAGACTGGAAAACCTGTAGCTGATTTTGGTATTCATGGACTCTGGCCTAACTACAATGATGGTTCATGGCCCTCAAACTGTGATCCTGACAGTGTCT TTGACAAATCTCAGGTACTTAATATTTCAAGAATAACTCGAATCGAATAGATAATCCATGTAGTAACCCCGCAGTGAGATAAAGACTTAACTGTGTTATT GTTGATTGAAATCAAACACATAACTTACTTTTAAAATGAGCATTAATATATATAAGGGGACAAAGTAAAGATATATTCATTTACCAAAAAACAGTAGGAT GTACTCACCTTTAATTAAATTATATCTAGATCTCAACATATTATTGATTTGATGATGAATACACTCTTGTTTCTCTTTATAAAGAAGCTGAGTTTAGATT AGTATTTTTCATTTTTCACGTAACAATGTAATGATTGAAGATGAATGTGATGAGTTGAGATGCCTTGAGGAGTAGCTGTATCATCGCTCACTTTTAATAT AAATAATACAAATAAATAATATATAGATTATATATAAATATTTGATATTATACCGTTGGTTTTTTTTTTTACTTCTTATTATTGATGTGTTTCTCCATGC CTTGAGAATTGAGATACATTTAGTTTTCTTAATCATCTCAAATTCATTATATATTAAGGAAGATATATTCAATTTCACCAATCTAATTCATGAAAATTAT TATATCTCTATCAACTTTGTATATATAGTATAAATTAACAAAACTAACCATTGTACTTAAATTTCATATATCTAATGAAATTCTCATAGATGAGTCATAT TTAATATAGATCTCAGAACTCATAAGCAGCATGAATGAGAAGTGGCCATCCCTAAGTTGCCCAAGCAGCAATGGCTTTAGATTCTGGTCACATGAATGGG AAAAACATGGTACCTGCGCAGAATCTGAGCTTGATCAGCGTGAATACTTTGAAACAGCTCTCAAATTAAAGGAGCAAATCAACCTTCTTCAAATTCTCAA GGATGCAGGGATTGAACCAGATGATGAATTTTACACCCTAGACAACATTTCAAATGCTATTAAAAAAGGTACTGGGTTTACACCAGGAATTGATTGTAAT AAGGATTCAGCCCATAACACCCAACTTTACCAAGTTTACTTCTGTGTGGACACTTCTGGCTCAAATCTCATTGAGTGCCCTATTCTTCCGAGGAGCAAAT GTGGTTCAAATATCCAATTCCCCAAGTTTTAAACAGAGTTTAACTGAGAAAATCATTTTTATGTTATTGTTTTCTTGTCATTGTTTCTTACATTTCACAT GGTGACTATTCAGCCACTTTCCTTTGTATGTGCCTTCTACCAATAAAAGTTTATGGGATTTCATTGCAACAGATTGGCAACAAAAAAACAAAGAGGAATT AGTAATGTTATTTAAATTAAAAAATAGTTAAGATAAGAATATGTTTACACTATCAATCATCTTTCAGTATTTTTGTGGACACGTGAAAAACAATTAGGAT ATAACTTCATTTTTTTTCTTTTCAAAATGAAATTAAAGTATTGAAGAATGTCACTAACTTGAGCTTGAAGGTTCCTCATGGTCTACATGCTGCTGCTACT GCTGCTACCAAATTCACATCACATAAGTGTTGTGCTGGCGCCAAGGCACATCCTGGTGCGCCTGTGTGCTGCGCCAAGGCACGTCCTGGTGCGCCTGTGT GCTGCGCCAAGGGACGTCCTGTGTGTTGCGCCACGGCACATCCTGGTGCGCATGTGTGCTGCGCCAAGGCACGTCCTGGTGCGCCTGTGTGCTGCGCCAA GGGACGTCCTGTGTGCTGCGCCACGGCACATCCTGGTGCGCATGTGTGCTGCGCCAAGGCACGTCCTGGTGCGCCTGTGTGCTGCGCCAAGGGACGTCCT GTGTGTTGCGCCACGGCACATCCTGGTGCGCATGTGTGCTGCGCCAAGGCACGTCCTGGTGCGCCTGTGTGCTGCGCCAAGG
• Tissue: pods
• Gene name: LI_gene_147103;
• Additional information: details;

Expression of Ll_transcript_315079

FPKM

• PAB: 16.9
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.3
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315079

• Blastp: Ribonuclease 3 from Arabidopsis with 62.41% of identity
• Blastx: Ribonuclease 3 from Arabidopsis with 62.41% of identity
• Eggnog: ribonuclease T2 activity(ENOG4111M7G)
• Kegg: Link to kegg annotations (AT1G26820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457112.1)
• Pfam: Ribonuclease T2 family (PF00445.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;