Id Trinity | TRINITY_DN46777_c0_g1_i12 |
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Name Transcript | Ll_transcript_315082 |
Sequence | CACTATCCAACAACACAGTTCAGGAAGAAAAGAAAAAGAGGGGCAAAAAAATGGAGTTCAAAGGATGCAATTTGATTAAGCTTCTGCTGCTAACACAGTG CCTCATAGTTCTCTGTGCTTATGGTGAGGATGTTCATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAAGCAGAGTTGCTGTTAT CCTAAGACTGGAAAACCTGTAGCTGATTTTGGTATTCATGGACTCTGGCCTAACTACAATGATGGTTCATGGCCCTCAAACTGTGATCCTGACAGTGTCT TTGACAAATCTCAGATCTCAGAACTCATAAGCAGCATGAATGAGAAGTGGCCATCCCTAAGTTGCCCAAGCAGCAATGGCTTTAGATTCTGGTCACATGA ATGGGAAAAACATGGTACCTGCGCAGAATCTGAGCTTGATCAGCGTGAATACTTTGAAACAGCTCTCAAATTAAAGGAGCAAATCAACCTTCTTCAAATT CTCAAGGATGCAGGGATTGAACCAGATGATGAATTTTACACCCTAGACAACATTTCAAATGCTATTAAAAAAGGTACTGGGTTTACACCAGGAATTGATT GTAATAAGGATTCAGCCCATAACACCCAACTTTACCAAGTTTACTTCTGTGTGGACACTTCTGGCTCAAATCTCATTGAGTGCCCTATTCTTCCGAGGAG CAAATGTGGTTCAAATATCCAATTCCCCAAGTTTTAAACAGAGTTTAACTGAGAAAATCATTTTTATGTTATTGTTTTCTTGTCATTGTTTCTTACATTT CACATGGTGACTATTCAGCCACTTTCCTTTGTATGTGCCTTCTACCAATAAAAGTTTATGGGATTTCATTGCAACAGATTGGCAACAAAAAAACAAAGAG GAATTAGTAATGTTATTTAAATTAAAAAATAGTTAAGATAAGAATATGTTTACACTATCAATCATCTTTCAGTATTTTTGTGGACACGTGAAAAACAATT AGGATATAACTTCATTTTTTTTCTTTTCAAAATGAAATTAAAGTATTGAAGAATGTCACTAACTTGAGCTTGAAGGTTCCTCATGGTCTACATGCTGCTG CTACTGCTGCTACCAAATTCACATCACATAAGTGTTGTGCTGGCGCCAAGGCACATCCTGGTGCGCCTGTGTGCTGCGCCAAGGGA BLAST |
Tissue | pods |
Gene name | LI_gene_147103; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315082
Blastp | Ribonuclease 3 from Arabidopsis with 61.09% of identity |
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Blastx | Ribonuclease 3 from Arabidopsis with 63.59% of identity |
Eggnog | ribonuclease T2 activity(ENOG4111M7G) |
Kegg | Link to kegg annotations (AT1G26820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457112.1) |
Pfam | Ribonuclease T2 family (PF00445.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |