| Id Trinity | TRINITY_DN46777_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_315077 |
| Sequence | GATCAACATACAAGTAATGAAACACGCAAACACATCATTTCCCCCTAATATGCATTGGATTTAGCAGAAAAAACTACAGAACAAAATATATAATAATATC ACTACTAAATAAACAAAAAGCTGGATCGACATGTCACTATTACAATGTATCAATTCTACACGGAAACCATGACGAGTAAGCTTATATGGGTAATCAATGT AGCTTCTCACATTCCGATTATAAATTCATCAATTCACAATCAACATTCCACAATTGCACCATCCATAAAATAACAAGAAACATAGTCCAAATCTCATTAA AAAGTTTGAGGCAAAAATGAAGTCTAAGGGATCCATTTTGATGAAGCTTGTGATTCTTCAGTACTTGGCAGTTCTCTGTTTTTCACAGGATTTTGATTTC TTCTACTTTGTTCAGCAGTGGCCAGGATCTTACTGTGACACACAGCGAAGTTGTTGTTACCCAACAACTGGAAAGCCTTCTGCCGATTTTGGCATTCATG GGCTTTGGCCTAATTACAAAGATGGCTCTTACCCTTCTAATTGTGATCCTAATAACCCTTTTCAGCCATCTCAGGTATTACTTTCTTATAGATACACTTT CTGCTTGCAAGTTAAGGCTGTGTCTACTCTCCTTCGGCTTCGTGCACTGGGCCGCCCATTTTGTATATATACTCAATGATAATTTTTATTTTATGAAGCC ATATCTATTTATTTGATGCTTTATTTTCCACTTATGTATGACAGATATCAGACCTCATCAGTAGCTTACGGAGGAATTGGCCCACACTAGCATGCCCAAG TGGGAATGGGATACAATTCTGGACCCATGAATGGGAGAAACATGGAACATGTTCAGAATCAATCCTACGTAGCCAACATGATTATTTTGAATCAGCTCTT AACCTCAAGCAAAGAGCAAACCTCCTACAAGCTCTTACAAGTGCAGGTACATTACATGTTACACTTTGCATTTTAATCTTGTATTTATGTAAATGTCACC ATACTGTTACATGAAGAACATAGATTCTCTGTCCCAAAAAGTAGTCTATGTTATTCAATAATATTTTATAAAATAATATTAAATATTGATTTATTTTTTA TAACTTTTTTTCCAATTAAGTGATGTATTTTGATTGGTTTGAGACACTATTGGAGACATCAAAAAGGACATGTGATCTCCGTAAGTCACATGAGTGCCAA ATTTAATTATGATTGTTAACATTTTATTTAATAATTAAAAAAATTGTGATTTTATGGCACCTAATTACCTTGTATTTGTTAATAGGAATACAACCTGATG GGGGGTCTTATAGCTTGAGCAGCATTAATTCAGCAATAAAAGGTGCTATTGGGTACACTCCATTTATTCAGTGCAATGTGGACTCAACTAGTAACAGCCA ACTTTACCAAGTTTACTTGTGTGTGAACACCAATGGGTCAGACTTCATCGAGTGTCCTGTGTTCCCTAGTGGCAGATGTGCTTCAGAAATTGAGTTCCCA TCTTTCTAATTCCATTGGATTAATCTACCCCTCCATGTTCATTTGATTAGTTTTGCTTACATTAATGTTATTGTATACATGTTACATTGTTCCATTGCTT TTTAGTTACTTTCATATTCTAGTCCACTAGTACTTGTTATACCAATGTTACTCATCAATTGTACTTGTACTTCTTTCAATTGGTTTGTGCTTTATGGGAC CTAATGTTTTCCTTGACCATTAGTTATATTACCAAAAGTGAAATTTTTTGACGCATTTGGATCACAAACTTTGTTACTCAATGTATAGAAGACAAATCCC ATTAACTCAATTAATAACâBLAST |
| Tissue | pods |
| Gene name | LI_gene_147103; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315077
| Blastp | Extracellular ribonuclease LE from Lycopersicon with 73.75% of identity |
|---|---|
| Blastx | Extracellular ribonuclease LE from Lycopersicon with 73.75% of identity |
| Eggnog | ribonuclease T2 activity(ENOG4111M7G) |
| Kegg | Link to kegg annotations (544098) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434081.1) |
| Pfam | Ribonuclease T2 family (PF00445.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |