Ll_transcript_315074

• Id Trinity: TRINITY_DN46777_c0_g5_i1
• Name Transcript: Ll_transcript_315074
• Sequence: CACGTTATATTGCAACCACCAAGGAAATAGGGGCATGTTTATTTTTCAAAGTACTAGCCCTAAAGCATGACCATGTAATAATAATGCTATAGTAACCGAA TATGCTTCCAATAATTCTCATGCTCCTTCAACAAAACTTTTTATACCCTTTTCTAACTGTCTCTACATTCTATCAATCTAAGCATATGCTCTATGATATT CTACCAAACTTAGACAAATAAATCACCCCTTAACCCCTTTTTCATAATAACCATATCTTACCAAACCATTTTGGCTTTGATCTTCTCCTTAAACATATTT CTCTTCCTTAAATTTTGTCATTTTCTAACCTTAGGGAGAGGATGAAATTTGGGAAGAGATTGAAAAAACAGATTCAGGAGTCGTTTCCGGAATGGAGAGA CAATTACTTGTCATACAAGGAAATGAAGAAGTTGGTGAAGTTGATATCTGGGTCACCCATGTTCATGAATGGGTCATTAGAATATGGTAAGGGAGAGGCT GAGTTTGTGTATTTGTTGAACAATGAGATAGAAAAGTTCAATGGATTCTTCATGGAAAAAGAAGAGGATTTCATCATCCTCCATGAGGAGTTACAACAGA GAATCAAAGGAGTAGTTGAATTATGGGGACCAAATGGAACTCAGCCTTCAAAAGTGGATTATAAGGAGGAGATGGCAAAAATCAGAAGAATTATTGTTGA TTTCCATGGTGAAATGGTTCTCCTAGTAAACTATAGCAACATTAATTACACGGGTTTGGCTAAAATTTTGAAGAAATATGACAAGAGAACAGGAGGGCTA CTACGTTTACCATTCATTCAAAAAGTTCTAGAGCAACCCTTTTTCACAACCGATCTAATTTCCAAACTTGTGAAGGAATGTGAAAGAATAATTGATAATG TTTTCCCAGCTGAAGAAGAAAAGGCTGAAAAAGCAAAAGAAACAAAAGAAGCTATTATAGTAGTAGGAGAAGGGATTTTTAGAAACACAGTTTCTGCTTT ACTTACAATGCAAGAAATCAGAAAAGGTAGCTCTACTGAAAGCCCCTTTTCTCTTCCCCCTCTCAGTTTTCCAGATTCTGATCTTATTAGATCATTACAA CTCAATGCTGCAGTGCCCATTGTTTAGTGAAATTGATAATAATGTATCAGATGATGATAGTGACAATAGTTTTAGAGATTAAAGTATTTGTTTATCTCCT TAAATTCATTTAGAGATTGACGTATGTTTTATTTTTTCTTTTTATAATATACTTCAAAATGAAAACTGCTAAAAATGAAAGAAATAAAATACATGTCTAA CACTAAGTAAGTTTAAGGAGATAAATTATCTACGGGTATGAGATGATACTTTATTATCATAGTTTTATTATAAATTAGCTTGTTATAATAGGAGATATTA CATTAGTAAATCTTAATTTATGCACTTTTGATGGAGAAACACATTAGTTACTTTAGAAGGTTAAGAAGAATCTTTCCGAGGCTAAATTACTTAGTTAACA ATTATTAGGGTGCTCACATTATGTATTCCCAAGGAAAAAGATGTATTAATATGTTGGAATAATGTGTTTTTTCATCAATGGTGTTGGTGATAATCTAGTC TAGACATTTCTCATTTTGAA
• Tissue: pods
• Gene name: LI_gene_147107;
• Additional information: details;

Expression of Ll_transcript_315074

FPKM

• PAB: 17.8
• PNAB: 1.8
• PS1: 3.2
• PS2: 1
• PS3: 1.8
• PW1: 0.3
• PW2: 0.5
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315074

• Blastp: SPX domain-containing protein 3 from Arabidopsis with 59.09% of identity
• Blastx: SPX domain-containing protein 3 from Arabidopsis with 54.96% of identity
• Eggnog: SPX domain gene(ENOG410XU76)
• Kegg: Link to kegg annotations (AT2G45130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446998.1)
• Pfam: SPX domain (PF03105.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;