Id Trinity | TRINITY_DN46782_c0_g1_i2 |
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Name Transcript | Ll_transcript_315104 |
Sequence | TTCTTCATTTATTTTCTCCTTGGAAGTCTTGTTATATGTTGTACAAACACTGAAGCTGCAGTTTAGAAAATAAAGTTGATGAGCTTCGTGCGCTTATGGG GAAAGTAGATGGTGACCCATTGAGAATAGTTGGCGTTGGAGCTGGTGCATGGGGAAGTGTATTCACAGCTATGTTACAAGAGGCTTATGGTGGATTAAGA GATAAGGTTGTGATTAGGATATGGAGAAGAGGTGGAAGAACGGTTGATAGGGCCACCGCTGAGCACTTGTTTGATGTCATCAATTCAAGGGAGGATGTAC TGAGGAGGCTCATTAGGCGCTGTGCATATTTGAAATATGTTGAGGCCAGATTAGGTGATAGGATCCTTTATGCTGATGAGATTTTGAAAGATGGGTTTTG CTTCAATATGATTGATACCCCTTTGTGCCCTCTCAAGGTTGTCACAAACTTGCAGGAGGCTGTATGGGATGCTGATATTGTTATTAACGGCTTGCCATCA ACTGAAACGCGCCAGGTGTTTGAAGAAATTAGCAACTATTGGAATGATAGAATTACTCTTCCTGTTATTATTTCCTTGGCAAAGGGTGTGGAGGCTGAAT TCAGTCCTCAACCACGCATCATAACTCCCACTCTAATGATCAATCGAGCAACTGGTGTCCCCATTGAGAACATTCTATATCTTGGTGGACCTAACATTGC CTCTGAAATTTACAACAAGGAATATGCAAATGCTAGGATATGTGGAGCGGAAAAATGGAGGAAACCATTGGCAGTGTTTTTGAGGCAACCCCACTTTATA GTGTGGGATAATGGTGACCTTGTTACTCATGAAGTTATGGGCGGATTAAAGAATGTATATGCTATTGGAGCAGGAATGGTAGGTGGTTTAACAAATGAAA GTGCGACAAGCAAATCAGTGTACTTTGCTCACTGTACATCAGAGATGATATTCATCACTCATCTATTGGCAGAAGAACCAGAGAAGCTTGCAGGACCTCT GTTGGCAGATACATATGTAACTCTATTAAAAGGGCGTAATGCATGGTATGGGCAAAAACTAGCCAAAGGGGAGTTGAGGCTTGAAATGGGTGACAGCATC AAGGGGAAGGGGATGATTCAGGGAGTGTCGGCTATCAAAGCCTTTTATGAGCTACTAAGTCATTCCAGCTTAAATGTCCTAAATCCTGAACAAAACAACC TTGTCGCCCCAGTGGAGCTTTGCCCCATCTTGAAGATGTTGTATAAGATACTCATAACAAGGGAATCTCCGATAGAGGGTATTCTGGGAGCATTGAGAGA TGAGACGATGAATGATCCGCGTGACCGTATTCAGATAGCTCAAACCCATGTATTTTTCAGGCCATCTCTTCTTGGTCAGCAGAGTTAGAATCCCAGTATG GATGGGAATGGATTTGATTTGATTTAATTTAATTTAATTTAACATAATAGTTGAAGTGTGTTGTTATGGTAACAGCAATCGTGGAGAATATATATTAATT GTTGAGAATATTAGCAAATTATTTGTTGTTGTGTCAGCAAAAATAGTGAATTATTGAAATGATATAAGAAAAGTACAAAAATGTTGGCACCAGATTCGGG ATAGAGATTTGAAAGTTTCTTTGGGTTGTATTTTATGTATGCATGTATAGAAAGAAAGGATGAAAGGAGAGTGAAAAGCAGAATGGAGAAGTACCTGAGA GATAACTTCAGCGTAGACCACAAACATCCCTCCGATACAGCCCTTCTCCGATGGAGATCCGCTGTATCCGTCGTCAAGAATCCCCGTCGCCGCTTTCGCA TGGTGGCCAATCTCGCCCAACGCGCCGACGCCGAAAATAAACGCAAGAAGCTCCAGGAAAAGATAAGAGTGGCTCTCTATGTGCAAAAAGCAGCTTTGCA TTTTATTAACGCTGGGAGCCGTAGTGGTGGTTACATGCTATCCAAAGAGCTTCAGGAAGCTGGTTTTGGAATTGAACCAGATGAAATAGGAGCCATTGTT CGATCCCATGACAGAAAATGTTTAGAAAGTCATGGTGGAATTGATGGATTAGCCAGACATGTTTGCGTGTCATTGCAAGATGGTGTTAATTCATGCGATG TTTCTCATAGACAAAATATCTATGGCGTTAACCGCTATGCAGAGAAGCCCCCTCGAAGTTTTTGGATGTTTGTCTGGGATGCAATGCAAGACTTGACTCT AATGATCCTTATGTTATGTGCTGTCATCTCAGCAGGTGTTGGAATATCAACTGAGGGATTTCCAAAAGGGATGTACGATGGAGTGGGAATCATACTATGT ATTCTTTTAGTGGTCTTTGTCACTTCAATCAGTGACTATAAACAGTCTTTGCAATTTAAGGATTTAGATAAGGAAAAGAAAAATGTTAGCATTCAAGTTA CAAGAGATGGTAGAAGACAAAAGGTCTCTATTTATGATCTAGTGATAGGAGATATAGTTCATCTGTCAATTGGAGACGTTGTTCCTGCAGATGGGTTATT CATATCAGGATTTAGCCTGTTAATTGATGAGTCAAGCCTATCAGGTGAGAGTGAGGCTGTGAATGTTGATCAACGCAATCCATTTCTTCTATGTGGGACC ACAGTGCAAGATGGGTCTGCTAAGATGCTAGTCACTTCTGTTGGGATGAGGACTGAATGGGGAAGATTGATGGAAACTCTGAATGAAGGGGGAGATGATG AGACACCTCTTCAGGTCAAACTAAATGGGGTCGCAACCATTATTGGAAAGATAGGCTTGGGTTTTGCCCTGCTCACGTTCCTGGTTCTGACTGGCAGGTT TTTGTTAGAGAAAATAGCTCACCATGACATCACTCACTGGTCTTTAAGTGATGCATCTAAGCTTCTTGATTTCTTTGCTACTGCTGTTATTATAATAGTT GTGGCAGTTCCTGAGGGCTTACCTTTGGCCGTGACATTAAGTCTTGCATTTGCAATGAAGAAATTAATGAATGATAAGGCACTAGTCAGGCACCTCTCTG CATGTGAGACCATGGGTTCTGCTGGTTGTATTTGCACTGACAAAACTGGGACTTTGACAACAAATCACATGGTTGTAGACAAAATTTGGATTTGCGAACA AACTAAGGCAATAAAAAACAGTGATAGTGAAAATGTGTTGAAGCCCTCAGTTTCTGAAGAGATATTAGATCTCCTTTTGCAGTCCATATTCCAGAATACT GGCTCGGAGATAGTCAAAGGGCAAGATGGAAAGAACAAAGTTATGGGTACTCCGACAGAGTCAGCACTACTGGAATTTGGAATGCTTTTAGGGGGTGATT CTAAGTCTTATAATGAGAAGTATAAGGTAGTTAAAGTTGAACCTTTCAATTCAATCAGAAAAAAGATGTCTGTGCTTGTGGCTCTTCCTGATGGCACTAA CAAGTTTAGAGGATTTTGCAAAGGAGCATCAGAAATAATTTTGGAAAAGTGTGACAGATTTGTTAATGCAGAAGGCAAAGTCGACGAAATGAAAGAAGAT CAAAGAAAGAGCGTAACAGAAATTATCAATGGTTTTGCTTCTGAGGCTCTCAGGACACTCTGTATTGCCTTCAAGGATAATGAAGGATCTTCTGCAGGTA ATAGTATTCCTGAGGATAATTACACTTTGATTGCTATTATTGGGATCAAGGATCCAGTGAGGCCCGGAGTTAAAGAAGCTGTGAAGACTTGTCTAGAAGC TGGGATTACTGTCCGAATGGTAACTGGTGATAACATAAATACTGCTAAGGCAATAGCTAGAGAATGCGGCATCTTCACAGATGGAGTCGCTATAGAGGGA CCAGAATTCCGGAATATGAACCAACAACAGATGGAAGAGATAATTCCAAAAATACAGGTAATGGCTCGGTCCTTGCCTCTTGATAAGCACACCTTAGTGA CACATTTGAGGAATGATTTTGGCGAAGTTGTGGCAGTAACTGGTGATGGGACTAATGATGCTCCAGCTTTGCATGAGGCTGATATTGGGCTTGCTATGGG TATTGCTGGGACTGAGGTTGCAAAAGAAAATGCGGATGTGATTGTAATGGATGACAACTTCACAACCATAGTAAATGTTGCCAGATGGGGCCGTTCTGTT TATATTAATATACAAAAATTCGTGCAGTTCCAGTTGACAGTTAATGTTGTTGCTCTGATGCTGAATTTTATTTCAGCATGTGTTTCAGGCTCTGCTCCTC TTTCAGCTGTTCAAATGCTTTGGGTGAACATGATCATGGACACTCTCGGCGCATTGGCACTTGCTACAGAACCTCCACATGAAGGGCTGATGAAAAGGCC ACCTATTGGAAGGAACACCAAATTCATCACTGGGGTCATGTGGAGGAACATAATTGGCCAGAGCCTCTATCAAATTATTGTCCTTTTGGTCCTCAAATTT CGTGGGAGACAGATTCTCAAGCTCAATGGACCAGATGCTAATTCTGTTCAGAATACTGTCATATTCAATGCTTTTGTGTTTTGCCAGGTATTCAACGAGA TAAATAGCCGTGACATGGAGAAGATTAATGTTTTCAAAGGCATGTTCACCAGCTGGGTTTTCCTTATGGTCATGATCGCAACAATAGGCTTTCAAGCCAT AATAGTTGAGTTTTTGGGTGTTTTTGCTCAAACAGTTCCATTGAGCAAGGAGTTGTGGTTAACCACTGTCTTGATTGGTGCAACAAGTTTAGTCATAGCT GTTATCCTAAAATGCATTCCTGTTCCTCTCACCAGTTATGTTGCCACTCATCATGACGGTTATGATCAACTTCCAACTGGACCAGATCTTGCATGAACAT CATAAAACAATATGGTTAGTAGTATTATTTTTTACACATTTTTCAAAATTCCTAGAGCCTGATATTATAACTTTCATTTTACACTTTTGTTTATGCCTTC AAATTTCTATTTTTCCCACTCATTCTTTTGAAGTAGGATATTAAAGGATGTACTCATCAATTTTGCTTGTAACGGTTAAATTAGGTGGATAAATTTGAAA AGTTACACATATCTCACTGATTGAATTTTTAGAATTGTTG BLAST |
Tissue | pods |
Gene name | LI_gene_147141; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315104
Blastp | Putative calcium-transporting ATPase 11, plasma membrane-type from Arabidopsis with 67.25% of identity |
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Blastx | Putative calcium-transporting ATPase 11, plasma membrane-type from Arabidopsis with 67.25% of identity |
Eggnog | ATPase, Ca transporting, plasma membrane(ENOG410XNNC) |
Kegg | Link to kegg annotations (AT3G57330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412997.1) |
Pfam | Ca2+-ATPase N terminal autoinhibitory domain (PF12515.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |