| Id Trinity | TRINITY_DN46782_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_315107 |
| Sequence | GAATTTATAAAATTATGGATACCCCAGATCCACTAACTAATCAAGGATTGGAGTGATGCAAACCCATTGCAGTGAAAAATTGAATTCCAATAGGTAATTT TGAAAATGAGTTGTGAAGTCAACCCAATTTAGAGTGAAGAATATGAGAATGAGGGTTTCGGTAACAGCATAACACAACTACATTTGTTGTTTGTTGGATT ACTTTCTTTGCCATTCTTCCTTTTTACATTTCAAACAAATCACCCAGATCAGTGTTTTTTGTTATCATGTGATTGCTGTGGTTGTTTTGTTTTGTTTTAG ATGTACTCTGCTATCTTGGGGTGTCAATTTCCTCTTATAAAGTCTTCACCTTTCCTTATATTTTCCACTGGGTCTTCTAGTTTTACATCATTACCCAATA ACCCTTACCCTTTGTCTAGATCCACCATGTTTGCGACCACTGAATCTATGACTCACACCCACAATACTCATTCAAATCCTTCTCTCCTAAATGGAATTGG TAGCTGCAGTTTAGAAAATAAAGTTGATGAGCTTCGTGCGCTTATGGGGAAAGTAGATGGTGACCCATTGAGAATAGTTGGCGTTGGAGCTGGTGCATGG GGAAGTGTATTCACAGCTATGTTACAAGAGGCTTATGGTGGATTAAGAGATAAGGTTGTGATTAGGATATGGAGAAGAGGTGGAAGAACGGTTGATAGGG CCACCGCTGAGCACTTGTTTGATGTCATCAATTCAAGGGAGGATGTACTGAGGAGGCTCATTAGGCGCTGTGCATATTTGAAATATGTTGAGGCCAGATT AGGTGATAGGATCCTTTATGCTGATGAGATTTTGAAAGATGGGTTTTGCTTCAATATGATTGATACCCCTTTGTGCCCTCTCAAGGTTGTCACAAACTTG CAGGAGGCTGTATGGGATGCTGATATTGTTATTAACGGCTTGCCATCAACTGAAACGCGCCAGGTGTTTGAAGAAATTAGCAACTATTGGAATGATAGAA TTACTCTTCCTGTTATTATTTCCTTGGCAAAGGGTGTGGAGGCTGAATTCAGTCCTCAACCACGCATCATAACTCCCACTCTAATGATCAATCGAGCAAC TGGTGTCCCCATTGAGAACATTCTATATCTTGGTGGACCTAACATTGCCTCTGAAATTTACAACAAGGAATATGCAAATGCTAGGATATGTGGAGCGGAA AAATGGAGGAAACCATTGGCAGTGTTTTTGAGGCAACCCCACTTTATAGTGTGGGATAATGGTGACCTTGTTACTCATGAAGTTATGGGCGGATTAAAGA ATGTATATGCTATTGGAGCAGGAATGGTAGGTGGTTTAACAAATGAAAGTGCGACAAGCAAATCAGTGTACTTTGCTCACTGTACATCAGAGATGATATT CATCACTCATCTATTGGCAGAAGAACCAGAGAAGCTTGCAGGACCTCTGTTGGCAGATACATATGTAACTCTATTAAAAGGGCGTAATGCATGGTATGGG CAAAAACTAGCCAAAGGGGAGTTGAGGCTTGAAATGGGTGACAGCATCAAGGGGAAGGGGATGATTCAGGGAGTGTCGGCTATCAAAGCCTTTTATGAGC TACTAAGTCATTCCAGCTTAAATGTCCTAAATCCTGAACAAAACAACCTTGTCGCCCCAGTGGAGCTTTGCCCCATCTTGAAGATGTTGTATAAGATACT CATAACAAGGGAATCTCCGATAGAGGGTATTCTGGGAGCATTGAGAGATGAGACGATGAATGATCCGCGTGACCGTATTCAGATAGCTCAAACCCATGTA TTTTTCAGGCCATCTCTTCTTGGTCAGCAGAGTTAGAATCCCAGTATGGATGGGAATGGATTTGATTTGATTTAATTTAATTTAATTTAACATAATAGTT GAAGTGTGTTGTTATGGTAACAGCAATCGTGGAGAATATATATTAATTGTTGAGAATATTAGCAAATTATTTGTTGTTGTGTCAGCAAAAATAGTGAATT ATTGAAATGATATAAGAAAAGTACAAAAATGTTGGCACCAGATTCGGGATAGAGATTTGAAAGTTTCTTTGGGTTGTATTTTATGTATGCATGTATAGAA AGAAAGGATGAAAGGAGAGTGAAAAGCAGAATGGAGAAGTACCTGAGAGATAACTTCAGCGTAGACCACAAACATCCCTCCGATACAGCCCTTCTCCGAT GGAGATCCGCTGTATCCGTCGTCAAGAATCCCCGTCGCCGCTTTCGCATGGTGGCCAATCTCGCCCAACGCGCCGACGCCGAAAATAAACGCAAGAAGCT CCAGGAAAAGATAAGAGTGGCTCTCTATGTGCAAAAAGCAGCTTTGCATTTTATTAACGCTGGGAGCCGTAGTGGTGGTTACATGCTATCCAAAGAGCTT CAGGAAGCTGGTTTTGGAATTGAACCAGATGAAATAGGAGCCATTGTTCGATCCCATGACAGAAAATGTTTAGAAAGTCATGGTGGAATTGATGGATTAG CCAGACATGTTTGCGTGTCATTGCAAGATGGTGTTAATTCATGCGATGTTTCTCATAGACAAAATATCTATGGCGTTAACCGCTATGCAGAGAAGCCCCC TCGAAGTTTTTGGATGTTTGTCTGGGATGCAATGCAAGACTTGACTCTAATGATCCTTATGTTATGTGCTGTCATCTCAGCAGGTGTTGGAATATCAACT GAGGGATTTCCAAAAGGGATGTACGATGGAGTGGGAATCATACTATGTATTCTTTTAGTGGTCTTTGTCACTTCAATCAGTGACTATAAACAGTCTTTGC AATTTAAGGATTTAGATAAGGAAAAGAAAAATGTTAGCATTCAAGTTACAAGAGATGGTAGAAGACAAAAGGTCTCTATTTATGATCTAGTGATAGGAGA TATAGTTCATCTGTCAATTGGAGACGTTGTTCCTGCAGATGGGTTATTCATATCAGGTTACAGCTTGTTAATTGATGAATCAAGCCTGTCTGGTGAGAGT GAGGCTGTGAATGTTGATAAACAGAACCCTTTTCTTCTGTGTGGGACAACAGTGCAAGATGGGTCTGCTAAGATGCTAGTCACTTCTGTTGGGATGAGGA CTGAATGGGGAAGATTGATGGAAACTCTGAATGAAGGGGGAGATGATGAGACACCTCTTCAGGTCAAGCTGAATGGGGTTGCAACCATTATTGGGAAGAT AGGCTTGGGATTTGCTCTGCTCACATTCCTGGTTCTGACTGGCAGGTTTTTGGTGGAGAAAATAGCTCGCCATGACATCTCTAAATGGTCTCTAAATGAT GCATCTCAGCTTCTTGATTTCTTTGCTACCGCTGTCATTATAATTGTAGTGGCAGTCCCGGAGGGGCTGCCTTTGGCAGTGACTCTCAGCCTTGCATTTG CAATGAAGAAATTAATGAATGATAAGGCACTAGTCAGGCACCTTTCTGCTTGTGAGACCATGGGTTCTGCTGTTTGTATTTGCACAGACAAGACTGGCAC TCTGACAACAAATCATATGGTTGTAGACAAAATATGGATTTGTGAACAAAGTAAGGCAATAAAAAGCAGGGACTGCAAGAATGCGTTAAAGCCCTCCCTT TCTGAAGAGATATTTGATCTCCTTTTGCAGTCCATATTTCAGAATACTGGATCAGAGATTGTCAAAGGGCAAGATGGAAGGAACAAAGTCATGGGTACTC CTACAGAGTCAGCACTACTGGAATTTGGCATGCTTTTAGGAGGTGATTCTAAATCTTATAATGACAAGTATAAGATAGTTAAGGTTGAACCTTTCAATTC AATCAGAAAAATGATGTCTGTGCTTGTGACTCTTCCTAATGGCACTAACAAGTATAGAGCCTTTTGCAAAGGTGCATCAGAAATTATTGTGGAAAAGTGT GACAAATTTGTTAATGCACAAGGCAAAGTCGAGGAATTGAAAGAAGAACAAAGAAAGATCATCATAGAAATCATCAATGGTTTTGCTTCTGAGGCTCTCA GAACACTCTGCATCGCCTTCAAGGACATTGAAGGGTCTTCTGAAGGTAATAGTATTCCTGAGGATAGTTACACTTTGATTGCTATTATTGGGATCAAGGA TCCAGTGAGGCCCGGAGTTAAAGAAGCTGTGAAGACTTGTTTAGCAGCTGGGATTACTGTTAGGATGGTGACTGGTGATAACATAAATACTGCTAAAGCA ATAGCTAGGGAATGTGGCATCTTGACTGATGGAGTGGCTATAGAAGGACCAGAATTCCGGAAACTGAACCATCAACAAATGGAGGAGATAATACCAAAAA TACAGGTTGCAAAAGAAAATGCGGATGTGATTGTAATGGATGATAACTTCTCAACCATTGTGAATGTTGCCAGATGGGGTCGTTCTGTTTATATTAATAT ACAAAAGTTCGTGCAGTTCCAGTTAACAGTTAATGTTGTTGCTCTCATGCTGAATTTTATTTCAGCATGCGTGTTAGGCTCTGCTCCTCTATCTGCTGTT CAAATGCTTTGGGTGAACATGATCATGGACACTCTTGGCGCATTGGCACTGGCTACAGAACCTCCTCATGATGGGCTGATGAAGAGGCCACCTATCGGAA GGAACGCCAAATTCATCACTGGGATCATGTGGAGGAACATAATTGGCCAAAGCATCTACCAAACTATTGTCCTTTTGGTTCTCAAATTTCACGGGAAACA GATTCTCAAGCTCAATGGACCTGATGCTAATTCTGTTCTGAATACTGTCATATTCAACACTTTTGTGTTTTGCCAGGTATTCAACGAAGTAAACAGCCGT GACATGGAGAAGATTAATGTCTTCAAAGGCATATTCAGCAGCTGGGTTTTCATTATGGTCATGATCTCAACGATAGGCTTTCAGGCCATAATAGTTGAAT TTTTGGGTGCTTTTGCTCAAACAGTTCCATTGAGCAAGGAGTTGTGGTTAACAAGTGTGGTGATTGGTGCAGTGAGTTTAATAATAGCTGTTATCCTAAA ATGCATTCCTGTCCCTGTTACAAGTTACGTTGCCACTCATCATGATGGTTATCAACAACTCCCAACTGGACCAGACCTTGCATGAACATCATTCATAATG TGGTTAGTAATATCTTTGACATATTTTTTTTAAATTCCTATACATGCAGATATTATAACTCATTTTTTACTTTTTGCACCTTTGTTTGTGCCTTCAAATT TCTGTTTTCCCATTTCATTCTTTTGAACTAGGATATTAAAGGATGTACTCCTATAAATTTTGTAATTTTTTATTTTTCGTGACACATTGTAAATTAAAAT AAAATTTTAGAACAAAAAGAAGAAAATATAGTGTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_147141; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315107
| Blastp | Putative calcium-transporting ATPase 11, plasma membrane-type from Arabidopsis with 63.73% of identity |
|---|---|
| Blastx | Putative calcium-transporting ATPase 11, plasma membrane-type from Arabidopsis with 63.73% of identity |
| Eggnog | ATPase, Ca transporting, plasma membrane(ENOG410XNNC) |
| Kegg | Link to kegg annotations (AT3G57330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449585.1) |
| Pfam | Ca2+-ATPase N terminal autoinhibitory domain (PF12515.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |