Ll_transcript_316391

Id TrinityTRINITY_DN46788_c1_g1_i1
Name TranscriptLl_transcript_316391
SequenceATACATTAAAAATATTCACCACACCCAGAGAGAGAGAGAGAGAGTGAAAGAAAATGAATAAGTGAAGCAAGATCATCAACTTTTCAATCAGCACCTACCT TTTCCTTTAGCTAGGTTTTGAAAGTCCATAGAAAAGTCACATTACCAGTTCCTTAATTATCTTTTTTCTTCCAATCTTTGGCATTGAGAATTGACATTGG CCTCAATGAGTCGTCGAGGAAATAGAAATAGACAATTTTATCGTATCTCAGATGACGATAATTCTGATTCCTCCATTGGAAGATCAAGTTCTTCTCTACG TTCTCAAAGGAGTGAAAGATTCATAGCTAACCGATCTAGACGAAATGTTAGAACTTCTTCTTATCAAGAAAATAGTAACATTATGAACAACTATAGTCGT AGAAGAAATGCATTCCCTGGCCCTAGGATCCGTTATCCAGAACCAAACCTTTCTATTGTAGTAGAGAGAAGTTCTCTATCAACATCTAATGTTGATTCTG ATGCCAATTCTGAACCCCAATACCTATCAATGTCTTCACCTAGTCCTGAAATAAGAAGACAAATGCATTCTTTGATGGTACGTCTATGTGCTGGTGGCAC TCACCAATTGGAGGGGCACTTTGATGAAGAAGATGCTAGTGAAGATGAGGATGAGAATATGAACATGGGGCGGACTGAGGAAGAGATTATGACATCAATT AATCGTGAAATTTTTGAGTCCGAGGAGGAGGAGAATATAGAAAACAAAAAAGCATGTGGCATATGTCAGGAGGACTATGTGAATGGGGTAGAAATTGGGA AGCTGAGTTGTGAGCACAAATTTCATATGGAATGCATTAAACAGTGGCTTATGCTAAACAACATATGCCCCTTGTGTAGAAGAGTGGCACTATAATCTAT TATGGATCATGATGGAAATTGTGATGATGATCATTGATGATGTCTGAAACAGTGAACAAGTTTTATTAGGCCATTTGAATACTATTAAATACATGTATTT TCATTTTAATGTGGTTATAAATATGTACTAGATCATGATTATTTTCCCTTATGATGGGTCAGAATTATAATTATTGTACCCAATATTATTTGTTATGGTA CTCACCCTTCAAATATTGCACATTAGGTCC BLAST
Tissuepods
Gene nameLI_gene_147196; 
Additional informationdetails; 

Expression of Ll_transcript_316391

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_316391
BlastpProbable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 38.46% of identity
BlastxE3 ubiquitin-protein ligase MBR2 from Arabidopsis with 39.24% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (9272591)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019447288.1)
PfamRING-H2 zinc finger domain (PF12678.6)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;