Id Trinity | TRINITY_DN46795_c0_g2_i10 |
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Name Transcript | Ll_transcript_315620 |
Sequence | GATCCCGAAAGCAGTGACAGTGTATAATCCATTGCCTATTGTTCCTTACATTTCCGATAATAATAACAAGACATGACTTCCGTTGCCGGCGCCGCCGCAG CGAGATCGGTAATCCGATCATGTTCCACTCGCCGCGCCGCGTTCCGTCTCGGCTCGGAAGCTAAGTCAGCTCATTCGCCATTTCGCATGGCTTCCAATAA ACCTCTCTCTCAATCCATGTACAGGTGTCGTGTTGAATCGAGTTTCTGTGTGGAATCAATGTTACCTTATCATACTGCTACTGCAAGTGCGTTGATGACT TCTATGCTCTCTGTCTCTCGCGATAGCTACGGATGGCTTCTTGTAGGTAAGATCTCTGCTGCAATTGCGCTGAAATGGCTTCTTGATTGTTCAATTTGAT TATGTGAATTTGGAATGGTTTTTGGTATAGTGGCTTTGTCTTTGTGGATCTATTTCTGCACTATTATATGGTATATTATCTTTAGCTTTTGTTTGGTAGT ATTATTGTTGCACAGTTTTACCCTGTTTGATATGTGCTTAGTTAGTATGGATGCCTTTGATTTTGATGGTTTGGACTGGAGACTTCACTAAGAATTGTTT GAGGAGAAGGAGGTTTAGAAGTTATGTTTTATATTTTACATTTATATCGAGAAATGGTTCAGTGTACTATATAACATTGTTGAATCCATATAGCTGATTA AGGCTTAATTTTCATTTATATCGAGAAATGGTTCAGTGTACTCTACGTAGTGCGACTAAGGCTTAATTGTCATTGTTGTTGTGGAGAAAAGGTTATCTCG TGCACCAGGTCACCCGTTTATGCTGAGAAAAGATTAGGACTATAAAGAATATTTTGTTATATGAGCCCACTCTTTGGTCACCTAGTCTGTGTTCATTTTA GTTCCCCGATGATTGGATTTTACTTTTCAATTAGGTAGCTAAACATCTGTAGGATTCCCTGTGTTCTTCAATTTAATTTTCCGGTTACTGTTCTTTTCAA ATTCTTGGGTTAAACATTAACAGAGCCCAGACAGATTTGAGATATATAACCATTTAAAATATGTGTAATAAGTCAAGGGGGAAAGTGTTTAATCAATCTG ATACTTGGCCATATGTTTCCATAACTATAATTGTTAGGCTTGTAACTAAGAATGATGGAGTAAGCTATCCCCTGATTCTTCTGCTTTTCCCAGTCATACA ACTAAATCCTTTAGTGAAGCCGCTGCGCACACTCGTTTTGTTTGTAGGCCAAGAGAAGGCTATTTGAAGATCAAGAAGCAAAGATGGGTTGACATGGATC ATAGCCTTCTATTTAGGGCTTTAAATAAAAATTCTTATTACGAAGAATTGCGAGTGTCACATTGTTATACATTCTTATGTCAATCACATTTGTCTGCTCT GGGAATTTTGGTGAATGTGTACTTGGTTTATGTTGTGTTTTAGGATATAATTATTTTATCGAAGTTCATCTTGAATACAATTTTCAGGAAATAGAAAAGA ACAGTTGGTATGTTTTCTGGTGGGTTGTGAGTTCATACAAAAATAATTTGAGATTATTGTTAAAAATATTAAGGGTTTTGCTAAACATTGCTCTAAGAGC AATTGCTAAGGAGCCAAAGAATGCAAAGTAAATATTGGAAAACTAAAAATGTTAATCTTATATTATTGAATACATCATTTCCTGTTGTTGGCCTTACATT TTTAGGTCCTTAACCATTGCCTGACAATGTTTAACATACCCCATATATTAAAGTGCTACCTGCCAACATTTTTTTAAGAGTTATTGCATATTTGCATCTA CCTTCGATGTTTAATTACTTAGAATATTACTACACATGTCTTTTGTGACTGTTGTTGAAATTCTGTCATTGAAACCATAATCGATGCAACCTATTTTAGG TGTCATACATTATGGGGTCAATTGATACTTGAGGTGTATACTGATCTCTTTTGTTCAACCAGACTGCAATGATGATGTGTGATAACTGTTCTGAAGATTC AAGCAATCTTTTTATGTACAAATCTGCTCCATGAGACAATTTCTGCTGAAAAAAACTTTGGAGTTTTGACTGAGCCACTGGAGGGACAAGTTGAGTCCCA AAAGGAGCTCTAATATCTTGAGCACCTGTAATTCTTTTCTTTTTGTTTCAGATGCATGAATCGCCGCAACTT BLAST |
Tissue | pods |
Gene name | LI_gene_147231; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315620
Blastp | Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial from Arabidopsis with 58.46% of identity |
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Blastx | Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial from Arabidopsis with 58.46% of identity |
Eggnog | NA(ENOG410ZH16) |
Kegg | Link to kegg annotations (AT2G20585) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426363.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |