| Id Trinity | TRINITY_DN46796_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_316318 |
| Sequence | ATGATTTTTAGATTTAACTGAATTACGATAATCAATTGGTAAACCTATTTTAACATGTAATTCAGAAGTCATTTGATAAGTGATGTAGCCAAAAAATGCT ATATTGTTCCTCTTCATGTGAAAATTTAGGAAGATTGTTATGTTGTCTGAGATTTTCTGTTGAATCATGTGAGTTTACTGCTTTACCTGCCATTATTATG CTGTTTTGGCATAGAACAATTCTATGGCGAGCCGGATCCATGTCATCTCACTTGTACTGAACGAGCTGTGTTGGGGAAAAAACTAACTCGCCAATGAACC GGTTTGCTAGCTGAACATGGGTTTACTTTGGTGCCTACCCGATCCGGTTTACTATTTGAACTTGTTTTAGAAGTTAAGGCAATTGGAAGTGACGATCCAC CATTTGATTGGCACTCGTGTAATATATGAATTGTGAAAGGAACCTGGATATCAGAGCTTTGTTACTATCAGTGGTCCTTTGGTCATTTCACTAATGTATG AAATTGGACTACCTACAAATTCAAACAGAGTCTGATAGTCAAGCATCTGACCATGCAAACAGCACCTTATAGTCATCCTCTTTTTTGTTTCTCTCACAGG TTTGTACTTTCTATTGCTCCCTGGTTTTCCATAGTTTGCAGCAATATCTGTTTTCTGCATTTAGATTATTTGACTGTAGAATGGAACACACTAATATTGT AGAAACTTCGGTAGAAATGTGAAGACTAGTTCAGTAAAATCTCATGCACTGTGTCCCTCTCAGCTTGATCGGAAATGTGAATTCAATAGGAGACCTCATA TATGTAAACTTCCCATCCACTTAAAACAATACAGATTGTTAGTGGTTCCCAACACTGATGATGGTCATCCTGCTGCTTCAATAATAGATGATGAAATGAA CACACACGATGCTCCTAATGACCTACCACCGAAATTTCTCAGCAACTGGTCACCTCCGAGGTACTTGTGGAGGGGATTATCCGTTTTAATCCTGGCAGGA CAGGTAATTATGAATACTTTAAAGGGAAGGATTCATTGGAGGAATACTCTTCAACAATTGGAGAGAGTTGGTCCCAAATCAGTTGGGGTATGTCTTTTAA CCTCGGCCTTTGTTGGCATGGCCTTCACAATACAATTTGTAAGAGAGTTCACTAGGTTAGGATTGAATAGGTCCGTGGGTGGGGTTTTAGCTCTGGCATT TTCGAGGGAGCTAAGTCCCGTGGTTACAGCAATTGTGGTTTGCGGTCGCATTGGAAGTGCCTTTGCAGCAGAGTTAGGAACTATGCAGGTTTCTGAGCAA ACCGACACATTGAGAGTTCTTGGTTCAGACCCCGTTGATTATCTCGTGACGCCGAGAGTGATCGCCACTTCTATCGCCCTACCGCTTTTGACTCTACTGT GTTTCACATTAGGTATGGCATCTAGTGCCATCCTTGCCGATAGTGTTTATGGGGTGAGCATTAATATTATCTTGGATTCGGCGCGGCGAGCTCTCAGACC ATGGGACATCATTAGTGCAATGATCAAGTCACAGGTTTTCGGTGCCATCATATCTATAGTGAGCTGTGCTTGGGGTGTTACAACTTTGGGAGGTGCTAAA GGTGTTGGGGAATCGACAACATCAGCTGTGGTTATTTCTCTTGTTGGAATCTTCGTTGCTGATTTTGCTCTTTCATGTTGTTTCTTTCAAGGAGCAGGAG ATCAGCTGAAGAATTGTGTATGAGCAACTCGTCTTGTAAGTTCAATTTTGCTTATATGTACAATGTGAATGATCCATTTTACAAATATTCTATACCATGT ACTGGTCTATGTTTTCTTTTAGAGCTGCAATAAAATCACTTTACAATTTGCATGAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_147238; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_316318
| Blastp | Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic from Arabidopsis with 79.78% of identity |
|---|---|
| Blastx | Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic from Arabidopsis with 76.08% of identity |
| Eggnog | ABC transporter (permease)(COG0767) |
| Kegg | Link to kegg annotations (AT1G19800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448274.1) |
| Pfam | Permease MlaE (PF02405.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |