Id Trinity | TRINITY_DN46799_c1_g1_i11 |
---|---|
Name Transcript | Ll_transcript_315508 |
Sequence | CTAGTACATATTATTGGACCGTCGGCTCCAAATCCAAGTCATTTTGCAATTCTTGTCCGAGGAATACCCTGGTCTTCAGAAGAATCATACTATGATACAG TGAAAAAGTTTTTTTTATATTACCATGCATCAGCATACTTGTCACACCAAATGGTGTATAAGTCTGGGACAGTTCAGAAAATGAAGGATGATGCAGAACT TATGTATAAGATGCTTGGTGATTCAATGGGAAAGACCTGTAAGCCAAGTTTTTCGCAATGTTGCTTTTGTGGAGGACATACAAATTCTTTTAAGAAGATT TCTAATGAAATGGATAGTATACATGGGAGAACAGGTTACTCGGACAGGCATATCGATGGAAGAAAAAAGGAATGTGCAGCCGCTTTTGTGTTCTTTAAAA ATCGGTATGCTGCTCTCATGGCTGCCCAAAATCTTCAAACATCAAATCCTATGTTGTGGGTCACAGACCTAGCTCCTGAACCAAATGATGTTTACTGGAG CAACCTTTGCATACCATATAGGCAACTTTGGATTCGTAAGATAGCTACGGTTGTGGCATCCAGCACCTTCATGCTTGTATTCCTTATCCCTGTCACATTT GCACAAGGGCTGACTCAACTAGACAAGCTTGAGAAAATGTTCCCGTTTTTAACAGAGATACTTCAAATGAAATTTATGAGTGAGGTGGTGATTGGTTACC TCCCAAGTGCAATTTTGGTTTTATTTTTATGTGCTGTTCCACCAGTAATGATGCTATTTTCGGCAGTGGAGGGTTCTATTTCCCGTAGTGGAAGGAAGAA GAGTGCATGCTACAAAGTGTTGTACTTTACAATTTGGAATGTGTTCTTTGTTAATGTATTTGCTGGGTCTGTTATTAGCCAACTCTCAGTGTTTTCTAGT ATAACAGAACTACCTGCCCAACTTGCCAAGGCAGTCCCAGCGCAGGCTACCTTCTTCACAACATATGTTTTATCGTCGGGTTGGGCAAGCTTGGCATGTG AAATTATGCAATTGTTTCCACTTTTCTGCAATCTGTTCCAGAGATTTGTGGTCAGGTCTGGTGATGATTCAAGTGATGCCACCCTATCTTTTCCATATCA TACAGAAGTTCCAAGGGTCTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATATTGCCTTTCTTACTGTTCTACTTTTTCCTT GCATACCTCGTTTACAGAAATCAGGTTAGCACTTCTATCATGTTTTTGTCTCATTTTGCTGATCATGCAGGTCATTGCACCT BLAST |
Tissue | pods |
Gene name | LI_gene_147253; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315508
Blastp | CSC1-like protein RXW8 from Arabidopsis with 62.53% of identity |
---|---|
Blastx | CSC1-like protein RXW8 from Arabidopsis with 61.74% of identity |
Eggnog | transmembrane protein 63C(COG5594) |
Kegg | Link to kegg annotations (AT1G58520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416621.1) |
Pfam | Cytosolic domain of 10TM putative phosphate transporter (PF14703.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |