| Id Trinity | TRINITY_DN46799_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_315505 |
| Sequence | CTAGTACATATTATTGGACCGTCGGCTCCAAATCCAAGTCATTTTGCAATTCTTGTCCGAGGAATACCCTGGTCTTCAGAAGAATCATACTATGATACAG TGAAAAAGTTTTTTTTATATTACCATGCATCAGCATACTTGTCACACCAAATGGTGTATAAGTCTGGGACAGTTCAGAAAATGAAGGATGATGCAGAACT TATGTATAAGATGCTTGGTGATTCAATGGGAAAGACCTGTAAGCCAAGTTTTTCGCAATGTTGCTTTTGTGGAGGACATACAAATTCTTTTAAGAAGATT TCTAATGAAATGGATAGTATACATGGGAGAACAGGTTACTCGGACAGGCATATCGATGGAAGAAAAAAGGAATGTGCAGCCGCTTTTGTGTTCTTTAAAA ATCGGTATGCTGCTCTCATGGCTGCCCAAAATCTTCAAACATCAAATCCTATGTTGTGGGTCACAGACCTAGCTCCTGAACCAAATGATGTTTACTGGAG CAACCTTTGCATACCATATAGGCAACTTTGGATTCGTAAGATAGCTACGGTTGTGGCATCCAGCACCTTCATGCTTGTATTCCTTATCCCTGTCACATTT GCACAAGGGCTGACTCAACTAGACAAGCTTGAGAAAATGTTCCCGTTTTTAACAGAGATACTTCAAATGTAAGATGTTGCACACAATTATTATGGACCTT ATACTCTATGCACAACTCACATTTTTGGCAACATACCTGGACCAGAATTGGAAGAAATAATCATGCATAATAATTGTGTGTGAAACTTCACTTGATCTAA ATTTCTGAGCAACAAGGATGCCTCATATTAGGAATTCAGAATTTTCTAGTCTAATTCTTGATCATATGGTCCTTGGTCTACCAGAAATCCTGTTGCGCAA ATTTCAAAAGATTTCCGACATATTATTAGACTTGGACACTATACCAAGTATTGTTTTAAACATGTACTTGCAATTTTTTATTTACAATACATGATATTTG TGAATATGTTAGTGTTATGGTAGATCTTAAACAAGAGTCAAACATACAAGCAGACATTTCTCTTGTTAAAATATGAGTCAAACATAAGCAATGTCAAAAA ATTGCAGTTGTTGAGTCACTTTTTTGGGTCAAAATATAGATTGTAATATATTACTGTTGATGATTATTCATGAATATGGAATGTGGAAGGTTAACAAGGT AGTTTAAAATTTAAATTCTATACAGTTCATTTTAATTTGAAGCAATAATTTTTTCCAGGAAATTTATGAGTGAGGTGGTGATTGGTTACCTCCCAAGTGC AATTTTGGTTTTATTTTTATGTGCTGTTCCACCAGTAATGATGCTATTTTCGGCAGTGGAGGGTTCTATTTCCCGTAGTGGAAGGAAGAAGAGTGCATGC TACAAAGTGTTGTACTTTACAATTTGGAATGTGTTCTTTGTTAATGTATTTGCTGGGTCTGTTATTAGCCAACTCTCAGTGTTTTCTAGTATAACAGAAC TACCTGCCCAACTTGCCAAGGCAGTCCCAGCGCAGGCTACCTTCTTCACAACATATGTTTTATCGTCGGGTTGGGCAAGCTTGGCATGTGAAATTATGCA ATTGTTTCCACTTTTCTGCAATCTGTTCCAGAGATTTGTGGTCAGGTCTGGTGATGATTCAAGTGATGCCACCCTATCTTTTCCATATCATACAGAAGTT CCAAGGGTCTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATATTGCCCTTCTTACTCTTCTACTTTTTCCTTGCATACCTTG TTTACAGAAATCAGATTCTCAATGTGTATGTTACAAAATATGATGGTGGGGGACAATACTGGCCCATTGCTCACAACACTACGGTCTTTTCTCTGATCTT CGCTCAAGTTATTGCACTTGGAGTGTTTGGACTTAAACAATCAACAGTGGCATCTGGTTTTACCATTCCACTGCTCCTTGGTACCCTTCTATTTCACCAA TATTGTAGAGAGCGATTTCTCCCGGTTTTTCGGAACACTGCAGCACAGGTTCTTATTGACATGGATAAGAGAGATGAGCGTTGTGGAAGGATGAAAGATA TTTACAATGAATTGCACACAGCCTATTGTCAATTCTCTAGTGGCTCGAGTCAATCAGAATGTTTCAGTAGCCATCACGACGAAAGCACGCGTGTTCACCC TCCACAAGATTTGGAGACAGGCAAGGAAAATAGCAAAAATGATATGTCATCGAAGTTCTTAGGATTTTAGATATTATGAGAATTGGTATGATGTTCCCCT GAAGAATGTGATGCATGAACTATTGTTGAAGAAAATAGGAATTGGATGTTGGGCAATGAGTGAGTCTCTCTATACTACTTACCCATTTTCTATGTAATTG TAAATGTGCTTTATAGGATAATAATACATGCAGATTTTTCAGACGCAAATCACTTGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_147253; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315505
| Blastp | CSC1-like protein RXW8 from Arabidopsis with 60.65% of identity |
|---|---|
| Blastx | CSC1-like protein RXW8 from Arabidopsis with 66.34% of identity |
| Eggnog | transmembrane protein 63C(COG5594) |
| Kegg | Link to kegg annotations (AT1G58520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437872.1) |
| Pfam | Calcium-dependent channel, 7TM region, putative phosphate (PF02714.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |