Ll_transcript_315511

• Id Trinity: TRINITY_DN46799_c1_g4_i1
• Name Transcript: Ll_transcript_315511
• Sequence: TCCAAGTACAAGCATCTGGTATCCTTATTGTGTTAGTCATATACTTGTTTAGTGAAGAACTGATCACACATTTGGTCTTCTGGTTAATTATTGTATTGGC TTAGAGGTCTTGTAAGGCTATGGAAAACTTACACTCAGAGGCTAAGGAGATCATGAAGGGAACAAACACTGAAGATGATAATATCATAATAAACCCTGAG TTTGAGGATGGCCTGAATAATTGGTCAGGAAGAGGGTGCAAAATTGTATTGCATGAATCCATGGGTAATGGCAAAATCCTTCCAAAGTCTGGCAAGTTCT TTGCATCTGCAACAGAACGGACACAAAACTGGAATGGAATTCAGCAAGAGATCACGACACGAGTCCAGCGCAAACTGGCCTATGAGGTCACCGCTTTGGT TCGGATATTCGGCAACAATGTCACCACTTCTGATGTACGAGCTACTTTGTATGTTCAAACACCAGATTTTCGAGAGCAGTACATAGGCATTGCCAATGTG CAGGCAACAGATAAAGATTGGACTCAAATGCAGGGGAAGTTCCTTCTAAATGGTTCCCCATCAAAAGTGTTTGTTTATTTGGAAGGTCCCCCTTCAGGCA CAGACATTCTTCTCAATACTTTGGTTATAAAGCATGCTCCTAAAACACCTCCTTCTACACCCCCTGATTTTGAGGATGCTGCATTTGGGATTAATATAAT AGAAAACAGTGATATGGGTAAGGGAACCAATGGATGGTTTCCACTTGGTAATTGTACATTGAGTGTAGGAACTGGTTCTCCACGCATAATTCCAGCAATG GCAAGAGACTCTCTTGGGCCTCATGAACCCTTAAGTGGGCATTACATACTTGTAACCAACCGTACACAAACATGGATGGGTCCAGCTCAGATGATCACAG AGAAATTGAAACTGTTTCTAACTTACCAAGTATCTGCTTGGGTCAGAATTGGTTCAGGATCCAGTGGGCCTCAGAATGTGAATATTGCTCTCAGTGTTGA TGACCAATGGGTCAATGGAGGACAAGTTGAGGTGGCTGATGGAAAATGGCATGAAATTGGAGGGTCCTTTAGAATTGAAAAGGTGCCATCAAAGGTTATG GTTTATATCCAAGGTCCTGCTTCTGGTATTGACTTAATGATTGCTGGACTTCAAATTTTCCCTGTTCATAGACAAGCCAGGTTTAGATATTTAAGGATGC AGACAGACAAGATCCGCAAGCGTGACATAATCCTGAAATTCTCTGGGCTGGATTCAAGCGAGTGTCTTAGAGCTATGGTGAAAGTTACACAAATCCAAAA CGATTTTCCTATTGGATCATGCATCAATAGAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTTTGAATCATTTTAACTGGGCTGTGTTTGGGAAT GAGTTGAAGTGGTATTGGACTGAACCACAAAAGGGTAATTTCAATTACAAAGATGCTGATGATATGTTAGACTTATGTCAGAAGAACAACATAAACACAC GTGGTCATTGTATCTTCTGGGAAGTAGATGGCACTGTTCAACAATGGATTAAATCACTTAATAAAACTGATTTAATGACAGCTGTCCAAAATAGATTATC TGGTTTGCTTACTCGATACAAGGGCAAGTTCAAGCACTACGATGTTAATAATGAAATGTTGCATGGTTCATTTTATCAAGATAAACTAGGTAAGGATATA AGGGGTAATATGTTCAAGACAGCACATCAATTAGATTCATCTGCTACCCTTTTTGTGAATGATTATCATGTTGAAGATGGGTGTGACACTAGATCATCTC CTGAAAAATATATTCAACAAATTACTGATTTGCAAGGTCAAGGTGCTCCTGTGGGTGGAATTGGAATTCAAGGTCATATAGATAGCCCTGTGGGGCCTAT AGTATGTTCTGCTCTTGATAAATTGGGCACTCTTGGTTTACCAATCTGGTTTACTGAACTTGATGTGTCTTCTACTAATGAATATGTTAGAGCAGATGAT CTTGAAGTTATGCTGAGGGAAGCTATGGCACACCCTTCAATAGAGGGTATAATGCTATGGGGGTTTTGGGAATTGTTTATGAGCAGAGACAATTCACACT TGGTGAATGCAGAAGGTAGTATCAATGAAGCTGGGAAAAGATTCCTTGCTCTTAAAAAAGAGTGGCTATCTCACTCACATGGTCTTGTTGATGAGCAAGG GTACTTCACCTTCAGAGGTTTTAATGGAAAGTACAACGTGGAAGTTGTGACCTTAACTAAGGAAATTTCCAAGACATTTGTTGTTGTTGACAATGGTGAC TCTCCATTGGTGGTATCAATAGATTTATAATTGGCGTGGATACAAAGGAATTATATTTCTTGTTTATGAAGTGATGCATTTGTGGTTTCATACATTTTTT TAAAATATGGCTTGTTGAATTAAGTAGTTGGTATTTGATGTTATGATTGTTATGCTATATAATTCTTACAATGAAATAAAATAAGATCTATTAAACTAGC TTGTGAATTCAGTTATTTACACTCGTGTACCTCTTATTCTATCTTTTAAATAAACCAGGGAGAAAGGGAAAAGTAAAACACAAGATCAAAACATGCACAT TTACATAAAAGAGTTGGGAGATCAGGGCCATGTTGCTCTATCTCATAAAACCTACTATGTACAGGAGAATTAAATACACTGTTATTATCCTATTGTGCGT TTTTACAATTACATAGAAAATAGGATAAATAGCATACAAGGATCCACTAAGATTACTCAACCTCCTATTCCTATTTTCTCCACAGGTATCTGGAATCTGG ATTATCTTCGTCAGTTCCTTTAGAGGCACATCACCATGATTCTCATAACATCAACAAGCCTAAGAGCTACGATGAACTGCCGGCCATGACATATCTTTTT TGCTATTTTCCTTGCCTGAAAAATAAATTGCGAACATAAGCCAAGCTTTTATGTCCTTAATCCCATACAGAAATGTGAAATTCCAAGCATCGGATGTAAG CAAACCTGTCTCCAAATCCTCGGGAGGGTGAACACGTGTGCTTTCCTTGTGATGACTACTGAAGCATTCAGATTTACTGCAATCACTAGAGAATTGGCAG TAGGCTGTATGCAAATTATTATAAATATCTTTCATTCTTCCACAGCGCTCATCTCTCTTGTCCATCTCAAGAAGAACCTAAAACAAACTCTTACTTTTAT TTAGGTGAATGACAGACAACTGAGTGAGGAAGAGTGAGAGCAACAGAGGGCTTACCTGTGATTCAGTGTTCTTAACAACTGGGAGGAATCTCTCCCTACA ATATTGGTGAAATAGAAGGGTACCAAGCAGCAGTGGAATGGTAAATCCAGATGCTACTGTTGATTGTTTTAGTCCAAACACCCCGAGTGCAATAACTTGA GCAAAGATCAATGAAAAGACAGCTGTGTTGTGAGCAATGGGCCAGTATTGTCCCCCACCATCATATTTTGTAACATACACATTCAGAATCTGTAAAGGCT AGTGTTACACTAGAGAAAACATCTATCCTATAAACAAATCAAATATAACCAAATATCAAATATAACCAAATATCATTGCATGCATAGATGTAAATGTGCA CCAGC
• Tissue: pods
• Gene name: LI_gene_147256;
• Additional information: details;

Expression of Ll_transcript_315511

FPKM

• PAB: 0.6
• PNAB: 1.5
• PS1: 1.1
• PS2: 2.3
• PS3: 3.7
• PW1: 2.4
• PW2: 3.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315511

• Blastp: Anti-sigma-I factor RsgI6 from Ruminiclostridium with 40.46% of identity
• Blastx: Anti-sigma-I factor RsgI6 from Ruminiclostridium with 40.34% of identity
• Eggnog: NA(ENOG41123G8)
• Kegg: Link to kegg annotations (Cthe_2119)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416622.1)
• Pfam: Carbohydrate binding domain (PF02018.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;