Id Trinity | TRINITY_DN46807_c2_g1_i5 |
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Name Transcript | Ll_transcript_512269 |
Sequence | CTTTGTTTTGGTGCATTTCATTGAAAACTATATAAGTAACTGTGACAGCTATAATTCTCATAAGTCAACTTAATCCAAACACAAATAGAAGAAACTTCTT CTTTCTTTGTTTTTTCTTATTTATTGTACGCGTGAACCTTTCAATTCAACAAGGTAAGCCTCCATAACATGTCCTTGTCTTTGAATTTATTTATGCCTAA AGTTTTCTTTATTCTAGAGACCTTAAATACGAGAGCACATATTTAACTTCATATAATTGGTCAAAAAAATACTTAATTATTAATTTTTAACTTAGATGAT ATGCTTGTACCAACAGTCGATGATTCAAGTGATACATGTTTGATTTTCTTTAAGCAAGGTCTAGATTCCAGTCTTATGGATGAAAAATGTTTGTCGAGAG AGTTAGCCCCATATACATGTGGATATCTCTGGCTCGGATAAGATTGCCTCAGTATGAGAATACTTATGTGGAAAAAAAATGATATGCCGGCCTTAAATAC CTGCTTCACCAACTTTGGTTTACTTTTGTTACGTATACTAATTTAGTTCTGCTCTTATTTTAATCTTTAACTTCTTAGTTCTTCAATCTTTTGCTATCTG GGGTTACAGAAATTTTCAATCTTTTTCATTCTTGTTTACATATTTTATTTGCATATCATTTGTTGGTTCTTTCTCTCTTCACAAAAAGTTAATTTTTTCC TTCTTAGGTGTGGTTATACTATTAGTGAATTGTTCTTAAGATTCATTATTGTGAGGATTTGTTGAATTGAATTATATGCAATGAGCTGCTTTTCATATTT CAAGCACAAAACAAGAAAGTTGAGGCAAAGATCAGCACCTGAACTTAATGATCGTGAGAAATCCTTGTACTCAGGGGTTGATCGGTCATCCGGTTCGACC GCTTCTCCGCGTGGCATACCCGAATTGTATGAGGAGAAGGCTCATAATTTAAGGGTATTTTCTTACTTAGAGCTAAGGCATGCAACTAATGATTTTAGTA GGCTTTTTAAGATAGGAGAAGGTGGTTTTGGAAGTGTGTATAAAGGTACTATCAAACCTGTTGGTGGAAAAGGGGATCCTATTTTAGTTGCAATCAAAAG GCTTAACCAAGATGGATTACAGGTAAGAGATTCGGAGCATTTTATTGGAAGTAATTTTATTAGTAAATGTTCAAATGATACTTGATTATTTGCAGCTTAT ATTGTAACCTTTTGACTGTTGGACATGGTATTAGATTTCATAGCCAATGTGAATATCCATATTCCATAACATTAATTGAATCTGGCGTTAATTTAGTAGT GTAAGGCCCCACTAGATCTCTAGGTGGACCAAAAGGTCAACATTTTGATTTTCTGGGAACAATACTTGTTGGAAGGGGCAGACCCCTAAAAAGGGATTAG TTTCTTACCCATAATATCTTTGGTTATACAAAAAAAACTGAACCTGTTATTAATTCTTGTAGTTTGTAAGCTCCACAAAATATGCATAGATTAATTAAAT GGTATTATTGTATAGAACTTCATAGGGTGGGACTCCGTAGCGCAACGGTAAGGTTAGTTACCTTGTGACCTCCATGAGTTCAAATCCAAGGCTGCGTACA TATACCCTTGCTAGATCCCATTAGCTGGGAGCCTCGTGTACCGGGATAGAACTTTACACCACCGGTCGGCCACCCTTCTTTTAACCGGTTTTTTTAATGC TTGTGTTGTGTAGGGTCATAAGCAATGGTTGGCAGAAGTTCAGTTTCTTGGTGTTGTTGAGCACCCAAATCTTGTTAAACTCCTCGGATATTGTGCCGTG GATGGTGAAAGAGGGATTCAGAGACTACTTGTGTATGAATTCATGTCAAATAGAAGTTTAGAATCTCACCTTTTCAATAAAGCATATGACCCTCTTCCTT GGAAAAGAAGACTTGAGATAGCCCTTGGAGCAGCTCAAGGGTTAGCTTATCTGCATGAAGAGTCTGAAGTTCAGGTTCAAGTTAAACCTTTATGAGTTAT ATTATTTGTTCATCAAATGTAGAACATCATATATATTGATTTCTATCTCTCACTTACTTTTAACTTACCTTAGTACACGCGTTCTCGAAATACATCCGGA AGATTTGGATGAACCCAAAAGGTAACAAAATAAGTTAATTTAACTTTTGGTTTAAGTCTTAACCACTGAGATTGCTTGGAAATTATTACCACATAGATTT CACTCTAGGATTAATTGAAGCATGACGTGTGATAATCTTGCGAACGAGAAAGGCCTTCTTTCCTCGCTGACTAATGATTCGATCACTGACCTGTGCTTTT TATAGTCGGAAGCTGTTGGTACAATTTTCTCTTCGGAACAAAATTTATTCTGTTATTACTTTTTCGTTTCTTTGAAACAGATAACTGCCTCATGATATGA TGTGTTGGGAAGTAGAAACAAAATTGGTAGATTAAGAATCTCCTTAAGGACCATAACTTTTGATATTTTCCTTCCAATAATTGAGATGACACATCCTTTT GCTTTCTCGAAAATGAATTATTGCATCAGTAGTATGAATTGTTGCTGGCTGACACACTTTGGCTTTTCCTTCGGAATTAGGAATTTACGTCAATTGTATA AGCATATTGTGCTGCAATTACTTCATCTAGATATCTGCAGAATGTTCGAACGAAATGCAGATAACAGCATCACGGCACAAAGCTGTGTTGAACATAAAAT TAGCATATTCTTGAAGTTAAAGGCATAATAGTGGTGGAAAGTTAAGTTGGATATGCATGAAATATTGTGTCCCATGAGAGTTTAATGTTAGATGGGAGTA ACCAAACATAGTAAGTTCAAAAACTTAATCCGGTTTAGTTTTTCTTGAGAGTACAAGGAAAGTATTTGTACTTTGCTAACTTCTCTATGGCACAACTTCT CTATCATGGTAATCTTGTTAATTTTACATTTCAATATTGCATTACTTGAGTTTACATTTTTCTTCTGCTTCTAACAGATTGTGTGATACTGCTGTAGGTG ATATATCGAGATTTTAAATGCTCAAATGTATTATTGGATGAAAATTTTATGCCAAAACTTTCGGATTTTGGGCTAGCGCGGGAGGGGCCAATAGCTGGGC ATACACATGTTTCCACTGCTGTGATGGGGACATTTGGTTATGCTGCTCCAGATTATATTCAGACTGGCCATCTCACCACCAAGAGTGATGTGTGGAGTTT TGGCGTAGTTCTATACGAAATACTTACTGGAAGGCGTGCATTGGAGAGAAACCGGCCGAAACCAGAACAAAAACTTTTGGAATGGGTGAAACTGTACCCT CCTGAAAGCAAAAAATTTGTCTTGCTGATGGATCCAAGGCTTATCGGCCAGTATTCCATTTACGGAGCACAAGAACTAGCGAAGCTCGCAGATGATTGTC TGCATAAGAGTGCAAAAGACCGGCCAACAACGAGTCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGTTTCTGAGGATGAATCATCTATAGAGAAAAG CATCATTGATACATCTGATGATGACCCTCTTGATCCCGAAGAAAACCTGGATGAATCAACCCCTTCAGAGTCATGGACAAGGAGGATGGCCCATCTAGCG AAACTCGGTGAGCGCGTGGAGAGTGATAGTAGAAGAAAATTCTTGATCCTACAGAGTGCAAAAGTTCCATAATAGAAACTATTTGGGCCATGATGATGTA TAGAGTAGAATATAAATGTATCTGCCATGTATAGAATGTGAGTGACCCTTATTTTCTTTGTATAGTTAATGTTGAAACTTTAAGTGATTCAGAATATCAA CTTTGCTGATGCATTGAACATTCAGACTATTTGTGCAATGAAGCTAGTTTTGTGGCTACATCACAATGTCTTTCTACAATCATGCAAACTTTCTTTGGCT TATTGATAGTTTTGCCAAATGGTTATCTAAGTTTGTTTGATGTATGCTCAAACAATGATGCTGAATAATAGGCCTTGATTGTTGGCCTTAACATTAACAT TAGGGâBLAST |
Tissue | pods |
Gene name | LI_gene_147300; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512269
Blastp | Probable serine/threonine-protein kinase PBL19 from Arabidopsis with 63.89% of identity |
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Blastx | Probable serine/threonine-protein kinase PBL19 from Arabidopsis with 66.24% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT5G47070) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453508.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |