| Id Trinity | TRINITY_DN46808_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_512240 |
| Sequence | TATACCATCTGGTGTGGTCTGTTATCCACACAATCAGAGTGTACTGAACAAGAGGCAGAGAACAGTGAAGTGAAGTAGATTTTAGGTATGTCTACTTCCA AAGCAATAATGTCTTCATTAACCCACATGCGTCCTCTAACATGCGCCGCCTCAGCATCTTCTTCTTCTTATCCTTCACGACTAGTTCCCTACCCACCTGA CCTAATCAAATGGGTAACCAAAGAAGGTGGTTTCGTGCACCCAGCGGTTAAGATAGCACACTCTCTTCACTCCAATGGTCTTGGACTAGTCACCAATCAG CAAATTCCACGTGGCACTGACCTTATTATTCTACCTCACCATCTTCCGTTGAGTTTTAGGTCCTTTGATTCCGTTGATTCTGTGCTCGCTCAATTGGCAC ACCCAATTCCTGCTTTTGGCAGAGGAACTATGGGCAATGAAACTTGGTTTGAAACTTCTACAAGAAAGAGCAAAAGTTGGATCGTTTTGGTGGCCATATA TCAGCAATCTCCCTGAAACATATAGTGTGCCTATCTTCTTTCCTGGGGAAGACATAAAGAACTTGCAGTATGCTCCTCTTCTTCACCAGGTACTATACTC TACAATTGCAAAAAACCATTGATGACTGATGAAACATTAGAAAATTTGTATTGCCTAAGTGCAGACAACTAGTCAAGTGATGATTTTTTAGATTTTCGTT TTGACAAGAGAAATGAATAAATATACCATACATAGTAGATCTTTAATAGAAATTTTTTTGGTCTAGTGTCGTATGCTGGTAAATTTTGATATGCACTCAT GTGTGCCTTATTTTTCATTTTTTGTGTTTTTTATAAAATTGATGTATAAAAAGCCATTTGAAGAACTTAACCAACATATTTTACTGTGCATTTCATTTGC TTTTTGGGACATGAGAGAGTCACACCTTGATTTGAAACTTGTGGCTAATACTTTAAAACAAATTTGTAACGAACACCAGATGCTCAAATCATCTGTTTTG CTGTCTATTTAAATATATGCTGGTAGACATTCATTAGTAATAGTAAGTCATCTCCAAGTACAATTGTAAGCCTTCACTAAGGTTTGTAGCATGCCTAACC TAGGAGTGAGGCAACCTTCCCTCCCCTGAAAACTTTTAGCTATATATTATATATGTAATTTTGTGTGTGCATCTATACACAGTCACACACACAAGTGCCT TGCAGGCCTGCAGTATGAACGTTAATTAAGCCAATTAATGAGGCAGGTAAACAAAAGATGTCGGTTTCTTCTTGACTTAGAGCAAGAGATCAAGCGTGCC TTAGTCAATCTTACACCAGATAAGTATCCTTTTGGTGACCAAGAAGTACATGCATCTTCTCTTGGATGGGCAATGGCAGCAGTTTCATCTCGAGCATTCC GATTATATGGTAACAAGCGTCCAGATGGAGGCCACGTTGAAGTACCCATGATGCTCCCTCTCATTGATATGTGCAACCATAGTTTCAATCCAAATGCCAG AATTGTTCAGGAACGAGATACTGATAACACGAAAATGCAAGTGAAGGCATGTTTTCTCATGCTCTTCCTTATATAATCCTGCTGTACCTCTGCTTTTAAA GAATAAATTAAAACTGGATTTATCTTTGTCAGGGTAACTTTCTTTGCATCAGGTTGTGGCTGAGAGGGAAATCAAAGAAGATGATCCTTTATTACTTAAC TATGGCTGTTTAAGCAATGATTTTTTCCTTCTTGATTATGGATTTGTGGTAGACTCCAACCCGTATGATCATATTGAGCTCAAATATGATGGTGCTCTTT TGGATGCTGCAAGCATGGCTGCTGGAGTTTCATCACCAAACTTCTCGGCACCTGCTCCATGGCAGGAACTGATTTTGTCTCAGCTAAATCTAGCTGGAGA AGCTCCAGATATTAAGGTAACCCTTGGTGGTCAAGAAATAGTAGAGGGACGCTTGTTGGCTGCATTGAGAGTACTCCTTGCAAGTAATATGGAAACTGCA CAGAACTATGACCTTAACACACTCAAGTCTCTATCAGCTGAAGCTCCTCTTGGTGTTGCAAATGAGAAAGCTGTATTTCGTACCCTTATTGCTCTTTGCG TCATTGCGCTGGAACACTTCCCTACGAAAATAATGGAGGATGAATCATTGTTGAAGCAGGGTGCTTCAGGATCAACTGAGTTGGCCATTCAGTTCAGAAT CCAAAAGAAATCTGTGATTGTAGATGTAATGAGATCTCTCTCAAGGAAACTAAAGCTTCTATCATCCAAGAAAACTGTGACTGCTGAAGGCTAAGTGATA GTTAACATTTAGTGGTTTGCTTGTTGTCATGAATCTTATCCGCTCAACATTTCAGCATCTTTTTGTTCATTTATTGCAGAAACATTTTTTATTTCCTTGT TTTTTTTCCTATGATCCTCAAAGTCTATCTGCGAGTTGGATTTTGGAATAAAGAGAAATAGAAGGTTAAAGATTATCTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_147311; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512240
| Blastp | - |
|---|---|
| Blastx | Histone-lysine N-methyltransferase setd3 from Gallus with 34.92% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422532.1) |
| Pfam | Rubisco LSMT substrate-binding (PF09273.10) |
| Rfam | - |
| GO | - |