Ll_transcript_513249

• Id Trinity: TRINITY_DN46812_c3_g5_i1
• Name Transcript: Ll_transcript_513249
• Sequence: AGAGAATAATGGCGCCACGAAATTTGCGTTGATGGGATGAGAGGGAAGGAGAGGTGGGAACTAAACAAACAAATCACCCCATTCCTATTCTCATTTCAGA GAGAATAACAATTAACCAATTCCAATCATTAACCTTTCTCTCTTTCTCATTTCTCTTCATTCTCACACATTTCCTCACAACAATAAAACAATGCCGTCCT CATCTTTTTCTCTTTTTCCATTTGCGGTTACGTTCCCTCTCTTCTTTGCCTTCATAGCACTTGCCGCTGACCCTTCCTCATGCAATAACCCCATACAAAT GGTGAAGGTGCAGAATTGGATTGATGGCAAGGAAGGTGACTTGTATAATGGCATGACTGCAAAATTTGGTACTTCTTTGCCTGAGAAGGCTGATAAAACT CTTAGAGCTCCTGCAGTTCCTTCTAAACCTTTAGACTGTTGTGCCGCTTCAACTACCAAATTAACTGGATCAGTTGCTCTCTGTGCGCGTGGTACTTGTG ACTTCACAACTAAAGCTTCATTTGCAGTGTCAGGAGGTGCCACTAGCGTCTTGATGATAAATGACTCAGAGGATGTCTTTGAAATTCAGTGCTCCAATGA TTCCAAGGTAGATATTCCAATTCCAGTTGTGGAGGTAACAAAGTCAACAGGAGATGCTCTAAACAATTTTATAACGTCAGGAAAGAAAGTGGAAATTTTG TTATATGCTCCAACTCGCCCAATTGTAGACTACTCAGTTGGATTTTTGTGGTTGATGTCTGTCGGAACTCTTACTTGCGCTTCACTATGGCCAGATATAA CTGCTCGTGATGAGGATGAAGGCTATGAAAAGGGATCTTCTAATGCTGAAAAGGAGAATTCTGAGGATATTGTTAACATAGATGTAAAGGGCGCGATTGT CTTTGTCATAACAGCATCTACTTTTCTTCTGCTACTGTTCTTCTTTATGTCATCATGGTTTATCTGGGTGCTGATTGTAGTTTTCTGCCTTGGAGGTATT GAGGGGATGCACACTTGTATCGTAAGCCTCACTCTAAGCAAGTGTCCAAGTTGTGGTCAGAAGACTTTGAATTTACCTGTGGTTGGGGAGGTTTCTGTTT TCTCATTGGTTGTGTTGTTATTTTGTTTGGCATTTGCGATTGCGTGGGCTGCTACTCGGAAGAGTTCATTTTCATGGTTCGGCCAAGATGCTCTTGGCAT CTGTTTGATGATAACAGTCTTGCAGTTGGCTAGATTACCTAATATTAAGGTTGCAACTGTACTCCTTTGTTGTGCATTCGTATACGACATCTTCTGGGTG TTCATATCTCCAAAGATATTCCAAAAGAGTGTTATGATTACCGTTGCTAAAGGTGACAATGCTGGTGGGGAAGCAATTCCTATGCTTTTGAGATTTCCCC GTCTTACTGATCCATGGGGTGGTTATGATATGATTGGATTTGGAGATATTCTCTTTCCTGGTTTGCTTGTTTCCTTTGCTCGTAGATTCGACAAAGAAAC TAATAAAGGGATATTAGGTGGATATTTTCTTTGGCTTGTAATAGGCTATGCCATGGGCCTCTGCTTCACGTATATGGGGTTATATATGATGAAGGGTCAT GGACAACCTGCGCTCCTGTACCTTGTTCCATGTACACTAGGAGTCACTGTTATATTGGCATTGATAAGAGGTGACTTGAAGACCCTTTGGAGTTATAACC CAGACTCGTCTTCGGCAGGAGCAGATTCTGATGCTTAAATCAATACACTCTTCAATGGAATCTGGGAAATGATCTTAAGCTGAATCCATGTCAAGCTCAA TTGGGGATGCAAATTATAGTGCTTAGGAAAGATACCAAGTGTACAGGCAACTCTCTCTCTCTTGAACCTCCATAAATGTGTGTTGTATTTTTTGTTTAAT GATAAATGGATGTCTTTTTTATGGTTCAAGAAGGAAAAGTGTTGTGGATTTAAGCACATTCACTGCTTCTGATGCTACCTTTGTTACTTATTTTCTTTTC TCAGTTTAGGTTT
• Tissue: pods
• Gene name: LI_gene_147335;
• Additional information: details;

Expression of Ll_transcript_513249

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 0.6
• PS2: 0.5
• PS3: 0.7
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_513249

• Blastp: Signal peptide peptidase-like 2 from Oryza sativa with 55.19% of identity
• Blastx: Signal peptide peptidase-like 2 from Oryza sativa with 56.25% of identity
• Eggnog: signal peptide(ENOG410ZP52)
• Kegg: Link to kegg annotations (4350402)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441583.1)
• Pfam: PA domain (PF02225.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;