| Id Trinity | TRINITY_DN46819_c2_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_513412 |
| Sequence | GGTAGATGTATTTACCTGTGGAATCAGAAAGAATGTTTCTAGTATTTGAAGAATAAGTTAATTATTAAATACTTTCCAACTTGATTATTTAGTTGTTGAG AATAAGTTAATGATTGATTTGCTCATAAACCCTATTGAACCAGACTTTTGGACACCAATCTTTTCTCGAGATTAGTTCCCAAGTCATCAATGATTGTATA AGGCATTGATGAATATTAACAACAATTTTATTTGTAGATTGGGATTTGAAGTTGCAGCAAACCATGGTGGAAATGTTTCCTTTGAACTCAGCTGATGCAG CATATACAAAAATCAGAGGAATGCTTTCTACCCTCGGAGATCCTTTTACGCGAATTATCAGTCCACAGGAATACCAAGGATTTAGAATTGGAAGTGATGG AAACTTACAAGGAGTGGGCCTCTTCATAAATGTTGAGCCAAGAACAGGACATTTGATCGTTTTTTCCTGCATTGAAGGCAGTCCTGCTGCTCGTGCTGGT ATACATCAAGGCGATGAATTGGTCGAGATAAATGGGGAGAGGCTTGATGGTATTGATAGTGAAGCTGCAGCACAGAGGCTTAGAGGAAATGCTGGAACAA CCGTCACAGTAAAGGTCAAAGACTCAGGCAAAAACTTTGATATCCGAGAGGTCAAACTTCAACGAGAATTTATTAAGCTCTCTCCGATTTCCGTTGCGAT CATCCCTCACAGGTCCCCGGATGGGAAGGTAACAAAAACTGGCTATGTGAAATTGTCAGCCTTCTCTCAGACTGCTGCAGATGACATGAAGCATGCTATT CAGGAATTGGAAAATCAAGATGTGCACTCTTACATATTAGACCTACGGAACAATCCTGGTGGGTTAGTAAAAGCCGGTCTCGATGTTGCGCAGATATGGT TAGATGGAGATGAGACTTTAGTGAACACAATCGATAGAAGCGGGAATATGTTGCCAATTAATATGATCAATGGACATGCTATAACACATGATCCACTTGT TGTGATTGTCAACGAGGGAAGTGCAAGTGCCAGTGAGATTTTAGCCGGGGCATTGCACGATAATGGTCGAGCTATTCTTGTTGGAAACAAAACATTTGGT AAAGGAAAGATCCAGAGTGTCACAGAGCTTCATGATGGGTCAGCTCTCTTTGTTACAGTAGCGAAATATCTGTCACCGGCGCTTCATGACATAGATCAGG TTGGGATAATACCTGATGTGCAGTGCACGACAGAAATGCTTAATTCGACCAAGAAGATTTCAATGAAGGATAAAAGCTTAGCCTCATCTCTAGAAGCAGA TTCATGCATTATGGTAGCAGAACAAGAGTTGGACATGAAGGGGACTGCTTCTTGAACATTGCATTCTTTTCATTCTCATTTTGTTTCCATTGTTATGGTT GAAAGAAAGGTTCTGTTTAAGCCAATACATCAACTTGTACTATGTACATTGTGATCACTAGTATTTAACTGTAAACAAAATAGATAAAACAATTGTATAT AGCATCCAATAGAATAGTGGAAAATTAACTTCCAAGCTTAAGTGTTTTAGTTTATTAATTCAGTTATTATACAATAATCCCACTGAAGGGAACCTGGCAG TTTTATAAGTACTAACTCACTGCATTTAGCTTTGGACTAATACCATTTATCTCATGTCACTGGTTTGGTGGACAGAAATAGAGATAGGAGCTCATTTAGT GTATTTTTTGCCCTATGTGGAGCTGAGTAAAAAACTAATAAGATGAAATAGTGCAAGTTTTCCTCTCATATTGCAACACACTTTCTCTATACTGATACAC CTTTTTTAGCTCTCTCTCCTTGTTATGCTTTTGGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_147414; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513412
| Blastp | Carboxyl-terminal-processing peptidase 3, chloroplastic from Arabidopsis with 76.49% of identity |
|---|---|
| Blastx | Carboxyl-terminal-processing peptidase 3, chloroplastic from Arabidopsis with 76.78% of identity |
| Eggnog | protease(COG0793) |
| Kegg | Link to kegg annotations (AT3G57680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459724.1) |
| Pfam | PDZ domain (Also known as DHR or GLGF) (PF00595.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |