Id Trinity | TRINITY_DN46819_c2_g1_i11 |
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Name Transcript | Ll_transcript_513413 |
Sequence | TACGCGAATTATCAGTCCACAGGTCATAGAACCAACATTTCCATTTACCATAATTCCAATCATACCTTCTTGGTTAACAGAAGAGTAGTAACTAGGTCCA AAATTTTGTACTTTATGTTGCCTCTTCTTATCAGCGTACTTACCAAAAATACTATTCAAACATTATCATTTCTTAGATTAGCAATTCTGTTCTAAAAGTT AACTTTTGAGGTTAGGTTTAACAATGATTCCACTTACAGGAATACCAAGGATTTAGAATTGGAAGTGATGGAAACTTACAAGGAGTGGGCCTCTTCATAA ATGTTGAGCCAAGAACAGGACATTTGATCGTTTTTTCCTGCATTGAAGGCAGTCCTGCTGCTCGTGCTGGTATACATCAAGGCGATGAATTGGTCGAGAT AAATGGGGAGAGGCTTGATGGTATTGATAGTGAAGCTGCAGCACAGAGGCTTAGAGGAAATGCTGGAACAACCGTCACAGTAAAGGTCAAAGACTCAGGC AAAAACTTTGATATCCGAGAGGTCAAACTTCAACGAGAATTTATTAAGCTCTCTCCGATTTCCGTTGCGATCATCCCTCACAGGTCCCCGGATGGGAAGG TAACAAAAACTGGCTATGTGAAATTGTCAGCCTTCTCTCAGACTGCTGCAGATGACATGAAGCATGCTATTCAGGAATTGGAAAATCAAGATGTGCACTC TTACATATTAGACCTACGGAACAATCCTGGTGGGTTAGTAAAAGCCGGTCTCGATGTTGCGCAGATATGGTTAGATGGAGATGAGACTTTAGTGAACACA ATCGATAGAAGCGGGAATATGTTGCCAATTAATATGATCAATGGACATGCTATAACACATGATCCACTTGTTGTGATTGTGAGTAGTAACTTTAGTTGCT TGATATTAATAAAAATGACTCTTCCTTTTAATTCTGCAATCTTTTGTAGGAGTAACAAAATAGGAC BLAST |
Tissue | pods |
Gene name | LI_gene_147414; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513413
Blastp | Carboxyl-terminal-processing peptidase 3, chloroplastic from Arabidopsis with 80% of identity |
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Blastx | Carboxyl-terminal-processing peptidase 3, chloroplastic from Arabidopsis with 76.15% of identity |
Eggnog | protease(COG0793) |
Kegg | Link to kegg annotations (AT3G57680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459724.1) |
Pfam | Peptidase family S41 (PF03572.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |