Ll_transcript_513405

• Id Trinity: TRINITY_DN46819_c2_g1_i3
• Name Transcript: Ll_transcript_513405
• Sequence: GAAATTTGCATTTATCCTTGTTGTGTTATGCGATGGCATGATGAGAAGTGGATAAGATATATACCACACAGTTGGAGATAAGGTATGAAATATTAATTTG ATGAAGATAATAATAAGAAGAAGAAGAAGAGAAAAAAATGAACAACCTTTATTACTTAAATCTTAAAGCTACAATTCCACTCAAGCTCACAAAATCCAGT TCCATTGTTTTGATTCCTCGTAGATTTTCATTCCCGACATGTCACAGAAACAGCAACACTTACACACGGTCGGTGTCGATGTCAAGTGAGAGTGGGTGGA TAAAATCAGTTTCTAAAAGTGCTTTTGGATTTGGTGTTTCAGCTGCTTTTTTGTTTTCTGTTTTCTGTGATTCTCACTCAGCTCTAGCTCACTCCCTTAC TGTAGCCTTTCCTATTTCCAGGGCACCCGAGGTAATCCAATTATACTTGTAGTCTTTACATTACCAAGAAGCCCCTGTTTTAATGGTATAAGGTCTCACT GAATCCTCGGATATATGATATATTAGAGAAAGGTTCATGAGAGCGATACTTATTAGAATGACACGTCGTCGTAGGAGTTATGCCATAATTTGTTGAAAAT TTGACCAAAAAAAGCAATTGCTCAACCCCTTTTAACAGAAATCTGAATGCGCAAGTTTAAAGTAAAGAGTAGTGAGCTTTCAGCATACTATGGCAATATT AGAGTTTGTTTGTTCATAATCTCAAAGATTCCCTTGCTAGGTAAATGCAGTTCAAAGAACTCTTGTCGAAGCATGGGGTTTAATCCGAGAAACATTTGTT GATCCTACATTCAATCATCAAGATTGGGATTTGAAGTTGCAGCAAACCATGGTGGAAATGTTTCCTTTGAACTCAGCTGATGCAGCATATACAAAAATCA GAGGAATGCTTTCTACCCTCGGAGATCCTTTTACGCGAATTATCAGTCCACAGGAATACCAAGGATTTAGAATTGGAAGTGATGGAAACTTACAAGGAGT GGGCCTCTTCATAAATGTTGAGCCAAGAACAGGACATTTGATCGTTTTTTCCTGCATTGAAGGCAGTCCTGCTGCTCGTGCTGGTATACATCAAGGCGAT GAATTGGTCGAGATAAATGGGGAGAGGCTTGATGGTATTGATAGTGAAGCTGCAGCACAGAGGCTTAGAGGAAATGCTGGAACAACCGTCACAGTAAAGG TCAAAGACTCAGGCAAAAACTTTGATATCCGAGAGGTCAAACTTCAACGAGAATTTATTAAGCTCTCTCCGATTTCCGTTGCGATCATCCCTCACAGGTC CCCGGATGGGAAGGTAACAAAAACTGGCTATGTGAAATTGTCAGCCTTCTCTCAGACTGCTGCAGATGACATGAAGCATGCTATTCAGGAATTGGAAAAT CAAGATGTGCACTCTTACATATTAGACCTACGGAACAATCCTGGTGGGTTAGTAAAAGCCGGTCTCGATGTTGCGCAGATATGGTTAGATGGAGATGAGA CTTTAGTGAACACAATCGATAGAAGCGGGAATATGTTGCCAATTAATATGATCAATGGACATGCTATAACACATGATCCACTTGTTGTGATTGTCAACGA GGGAAGTGCAAGTGCCAGTGAGATTTTAGCCGGGGCATTGCACGATAATGGTCGAGCTATTCTTGTTGGAAACAAAACATTTGGTAAAGGAAAGATCCAG AGTGTCACAGAGCTTCATGATGGGTCAGCTCTCTTTGTTACAGTAGCGAAATATCTGTCACCGGCGCTTCATGACATAGATCAGGTTGGGATAATACCTG ATGTGCAGTGCACGACAGAAATGCTTAATTCGACCAAGAAGATTTCAATGAAGGATAAAAGCTTAGCCTCATCTCTAGAAGCAGATTCATGCATTATGGT AGCAGAACAAGAGTTGGACATGAAGGGGACTGCTTCTTGAACATTGCATTCTTTTCATTCTCATTTTGTTTCCATTGTTATGGTTGAAAGAAAGGTTCTG TTTAAGCCAATACATCAACTTGTACTATGTACATTGTGATCACTAGTATTTAACTGTAAACAAAATAGATAAAACAATTGTATATAGCATCCAATAGAAT AGTGGAAAATTAACTTCCAAGCTTAAGTGTTTTAGTTTATTAATTCAGTTATTATACAATAATCCCACTGAAGGGAACCTGGCAGTTTTATAAGTACTAA CTCACTGCATTTAGCTTTGGACTAATACCATTTATCTCATGTCACTGGTTTGGTGGACAGAAATAGAGATAGGAGCTCATTTAGTGTATTTTTTGCCCTA TGTGGAGCTGAGTAAAAAACTAATAAGATGAAATAGTGCAAGTTTTCCTCTCATATTGCAACACACTTTCTCTATACTGATACACCTTTTTTAGCTCTCT CTCCTTGTTATGCTTTTGGTT
• Tissue: pods
• Gene name: LI_gene_147414;
• Additional information: details;

Expression of Ll_transcript_513405

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_513405

• Blastp: Carboxyl-terminal-processing peptidase 3, chloroplastic from Arabidopsis with 76.49% of identity
• Blastx: Carboxyl-terminal-processing peptidase 3, chloroplastic from Arabidopsis with 77.83% of identity
• Eggnog: protease(COG0793)
• Kegg: Link to kegg annotations (AT3G57680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459724.1)
• Pfam: PDZ domain (Also known as DHR or GLGF) (PF00595.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;