Ll_transcript_511758

• Id Trinity: TRINITY_DN46820_c1_g1_i4
• Name Transcript: Ll_transcript_511758
• Sequence: TGAAGCCTCACATACTATACTAACACATACTTGGTGACTAGATTAATCATTTATCAACTTAGGACAGAAATCTTGTAGAGAAATTAATCAAAAGTTAAAA TGGCCACTTGTACAAATCTTCTAGAGAAATTAGTCAAAAAAGGTTAAAATGACCATACAGTCGAAAAGCGAATCTGGTTTCAACTCATGGGTTGTTTGTT ACGTACACATACAATCCTCATCTCTGTCTCTTTCTCTATATAACATTGTGCTTTATCCATATATCTATCTCTCTATCTTCATTTCTCTTCTTCAATCTCA CCCCGAAATTCCATGACAAACATGGGTGACAAAGGAGAAAAATCATGTCCCATATGCACTGAAGAGATGGACCTGACTGATCAGCAGCTGAAGCCATGCA AATGTGGCTATGAGATCTGTGTATGGTGTTGGCACCATATAATAGAAATGGCACAAAAGGATGAAACTGAAGGCCGTTGTCCAGCCTGCCGTTCACCTTA TGACAAAGAACGTATTGAGGCAATGGCAGCAAATTGCAAAAGATTAGTTGCCGAAATGAACTCGAAGTATAAAAGGAAAATGCAAAAGTTGAAGCCCAAG CCATCAGAAGGAAGGAAACATCTTACTGATGTTAGAGTCATTCAACGCAAACTAGTGTACATAATTGGTTTACCTCTTAACCTTGCACATGAAGATGTGA GTACTTCAATGCTGTTCTGTATCTCAATTTTGCTGTGGAGCATGGCAGGCATACTCCACATGTTTAAAGCGTCTTTTTAATTATTATTATCTGAACCATT TTCCCCATTGTTAACATTATTGTTTGGACTATATTAGCTACTTCAGCAAAGGGAGTACTTTGGCCGGTACGGAAAGGTTTTGAAAGTGTCAATATCCCGT ACCGCAACTGGCATGATCCAACATTCTGCAAAACACAGCTGTTGTGTGTAAGTTATTTTGAATGTCTCATAAGTAATCACCCTAGAACAATTTTCTAGCA GAAAGTTATACAAGTCCCTCAGTTATTTTACTATTTCCTTTTTAGTGTGTCTGTTGGTTCAGTCACATTTTCCTATCAAATTGCATTTCTTGAATAAAGT TTCTTATATTTAATTATTTCATATCTTTAGGTCTATTGGTTTAGTCATGTTTCTTTCCAAGATTAGAAACCAATTCTTGTAGACTGTAACAATTTATATA TCAAGTTGTATTTCATGAATAAAGGTTTCTTACCTATAGGTATATAACTTACTCAAAAGAGTCCGAAGCAGTCCGGTGTATACAATCAGTGCATTGTTTT GTATTGGAAGGTAGATCCTTGAGGGCTTGTTTTGGAACCACAAAGTATTGCCATGCATGGTTGAGAAATGTGGTAAAATAGTCACTTTAAGCTGATTAAT ATGAATGTTTTTTTACACAACTTTGCCTTTGTGTTATATTAAATTATAAGGTTTGTCCAGCCTTGCAGCAATAGAGATTGTTTATACCTACATGACTGTG GTTCTCAGGAAGATAGCTTTACTAAAGATGAACTAATGTTAGCATTTGCAAGGTATGTTGCTTCTCAACTCATGTACCCCATCAGTCTGTTTAACTTTTG AAACTTCTGTCTTCCTTAATAAGCATCAGCTGATCGTCTTTTATCTATTGTTTCTTCATTTAGAGTTCAAATCCAAAGTTGCAAATCAATGTCTCTTTGT TTGCAATTTTGTAAAACCGACAGATTAGTTAAACATACATATCATACTGTCAGTATCTTACTCAAATGCATCATTTAGTTCTCTCCCTAGTTTCCATAAA TATCCCACAGTTATTGGGTTTGTCCTAATTTTATTAGTTTTTTTATACAACAACCAAGCCTTATTCATTTTTTGTAGTCCTCCTTTATGACCTGTTTTTA TTTATTTTTTTCATTGCTTTCACCTCATCATGCTTGTTTAGACTTTCTCTATATCATGGTTTTTCGAATCTCATGAATCATGACTTCATTCATGCGATTC AATGGAAGTCTTATCTGCTTGATACAGATTGTGTGGAGTGTTGTTATGTTACCAGAATAACATGTTGAATTGCGGGAACTGCATGAACTGCAATTCTGCC CTGATTCTGAAGACACATATCTCTAAGGGATATCAAGCCAAACATCACTGTTGGGAAACCAACAAAGGTCATGATAGTTTGGTGTGGCCAAATCTTGTCG ATAGAGAGTTCTGTGAAGAAGGCAGCTGGAAACAGGTTCAGGCACACCACTAATTGCTGCCCAGATATATAGATACAGTGAACCAGCAATCACTGTGTAG GGACATAGGGTTTTCTTGATAGGTTTTAAAAATTAGAGAGATAAGAGTATGGAGAACCCTTGTAATTAATGTACAGAAAATAAGGAAACAAAAATATAAG GAAAATATTGTATATAGAAAAGGGAAATAAAAATATAAGTAAACTAGTATGCATATAAAAGGAAATCAGAAAATCATCTATTTCTTACTTTTGTAGTTTT ATTATGAAAAAATATATTCTGTATTAGTTTTAGTGATTAATTGTGTATCTTATGATTAACGATACATTTTAATTCTGATTCAGACAATAAGAATTCTGAT TTGTGATTCAATTTCTCTTATCAACTACATTTTATTGTTTATGCTTGGTAGTTGTATGGTCTTTGATTATATTTTTGTTGTATTGTATTTTGGATTTTAC AGGAGTAGGGTCCAACAAATT
• Tissue: pods
• Gene name: LI_gene_147419;
• Additional information: details;

Expression of Ll_transcript_511758

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511758

• Blastp: General negative regulator of transcription subunit 4 from Saccharomyces with 37.23% of identity
• Blastx: General negative regulator of transcription subunit 4 from Saccharomyces with 28.3% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YER068W)
• CantataDB: Link to cantataDB annotations (CNT0002474)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443043.1)
• Pfam: RING/Ubox like zinc-binding domain (PF14570.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;