Ll_transcript_511770

• Id Trinity: TRINITY_DN46820_c1_g1_i8
• Name Transcript: Ll_transcript_511770
• Sequence: TGAAGCCTCACATACTATACTAACACATACTTGGTGACTAGATTAATCATTTATCAACTTAGGACAGAAATCTTGTAGAGAAATTAATCAAAAGTTAAAA TGGCCACTTGTACAAATCTTCTAGAGAAATTAGTCAAAAAAGGTTAAAATGACCATACAGTCGAAAAGCGAATCTGGTTTCAACTCATGGGTTGTTTGTT ACGTACACATACAATCCTCATCTCTGTCTCTTTCTCTATATAACATTGTGCTTTATCCATATATCTATCTCTCTATCTTCATTTCTCTTCTTCAATCTCA CCCCGAAATTCCATGACAAACATGGGTGACAAAGGAGAAAAATCATGTCCCATATGCACTGAAGAGATGGACCTGACTGATCAGCAGCTGAAGCCATGCA AATGTGGCTATGAGATCTGTGTATGGTGTTGGCACCATATAATAGAAATGGCACAAAAGGATGAAACTGAAGGCCGTTGTCCAGCCTGCCGTTCACCTTA TGACAAAGAACGTATTGAGGCAATGGCAGCAAATTGCAAAAGATTAGTTGCCGAAATGAACTCGAAGTATAAAAGGAAAATGCAAAAGTTGAAGCCCAAG CCATCAGAAGGAAGGAAACATCTTACTGATGTTAGAGTCATTCAACGCAAACTAGTGTACATAATTGGTTTACCTCTTAACCTTGCACATGAAGATCTAC TTCAGCAAAGGGAGTACTTTGGCCGGTACGGAAAGGTTTTGAAAGTGTCAATATCCCGTACCGCAACTGGCATGATCCAACATTCTGCAAAACACAGCTG TTGTGTGTATATAACTTACTCAAAAGAGTCCGAAGCAGTCCGGTGTATACAATCAGTGCATTGTTTTGTATTGGAAGGTAGATCCTTGAGGGCTTGTTTT GGAACCACAAAGTATTGCCATGCATGGTTGAGAAATGTGCCTTGCAGCAATAGAGATTGTTTATACCTACATGACTGTGGTTCTCAGGAAGATAGCTTTA CTAAAGATGAACTAATGTTAGCATTTGCAAGGTATGTTGCTTCTCAACTCATGTACCCCATCAGTCTGTTTAACTTTTGAAACTTCTGTCTTCCTTAATA AGCATCAGCTGATCGTCTTTTATCTATATTGTTTCTTCATTTAGAGTTCAAATCCAAAGTTGCAAATCAATGTCTCTTTGTTTGCAATTTTGTAAAACCG ACAGATTAGTTAAACATACATATCATACTGTCAGTATCTTACTCAAATGCATCATTTAGTTCTCTCCCTAGTTTCCATAAATATCCCACAGTTATTGGGT TTGTCCTAATTTTATTAGTTTTTTTATACAACAACCAAGCCTTATTCATTTTTTGTAGTCCTCCTTTATGACCTGTTTTTATTTATTTTTTTCATTGCTT TCACCTCATCATGCTTGTTTAGACTTTCTCTATATCATGGTTTTTCGAATCTCATGAATCATGACTTCATTCATGCGATTCAATGGAAGTCTTATCTGCT TGATACAGATTGTGTGGAGTGTTGTTATGTTACCAGAATAACATGTTGAATTGCGGGAACTGCATGAACTGCAATTCTGCCCTGATTCTGAAGACACATA TCTCTAAGGGATATCAAGCCAAACATCACTGTTGGGAAACCAACAAAGGTCATGATAGTTTGGTGTGGCCAAATCTTGTCGATAGAGAGTTCTGTGAAGA AGGCAGCTGGAAACAGGTTCAGGCACACCACTAATTGCTGCCCAGATATATAGATACAGTGAACCAGCAATCACTGTGTAGGGACATAGGGTTTTCTTGA TAGGTTTTAAAAATTAGAGAGATAAGAGTATGGAGAACCCTTGTAATTAATGTACAGAAAATAAGGAAACAAAAATATAAGGAAAATATTGTATATAGAA AAGGGAAATAAAAATATAAGTAAACTAGTATGCATATAAAAGGAAATCAGAAAATCATCTATTTCTTACTTTTGTAGTTTTATTATGAAAAAATATATTC TGTATTAGTTTTAGTGATTAATTGTGTATCTTATGATTAACGATACATTTTAATTCTTGATTCAGACAATAAGAATTCTGATTTGTGATTCAATTTCTCT TATCAACTACATTTTATTGTTTATGCTTGGTAGTTGTATGGTCTTTGATTATATTTTTGTTGTATTGTATTTTGGATTTTACAGGAGTAGGGTCCAACAA ATTATTGGCGCTACAAATAATTTGAATCGTCGTTCAGGCAGCGTTTTACCACCGCCTGCAGCTGACTCTAGACATACGTCATCAGCGACCGATTTAGTTT CTGGAAGTCCTTCGGAAAAAATTGAGAACCAGATCAAAGGATCCTGTTCTGGTATTGGAGCAGACATTTCAGCAGCAATTCCTGCAGTGACCTCTTGGAT TAGGTGTGTATCTGGCAATCTTATACAGGATACAAATTTGTCATGTTCTGGTACTCTGTTCAATAGAAAAGTTGAGGCATCTAATGACCCACAAGCCCTT ATGTCAGAAGTTGCTTCCACTGAAAGGTCTGATCTTAATAGTTCAGGGGAAGCTGAAAATAGCTCTGAGATGGACTCTAATGCTTTTACGGGCAATGATC AAGACATGGTTGCATCCTCTGAAAGCACAAGCTCCAGTAACCATTGTGATTTCGACATTGACAAAGTTGTGAGCGTTGATTCAAATAAGGATGTACAGGG CTTATGTTCAGGGTTATCATCTGTTAGCATGTGCAGTCCACTCGAAGATTCATCTTTCATTCCAGATTCAGTCAGATTACATTATACCCATAACTCAATC AACTCTTCTATAGGGAAAAGTTTGTGGCAAGATAATGAATATTCATATTCGAAAGAACATTCAACCACACCAGCTTTCTGGGAAGACATTGTTGTCGAAG ATGTGATAAATATAAATCGCGACCAGCAACATTTTAGCAAAGGAATCAATAATGTATCATCTGGGCTCTGTTCATCTTGTCTGCCTCAGAATGTGAACCA ATCAAGCCATCAATTGTGGCCACAAAAACAAGAACAAATTTGTAACCATTATCAGTTGGTTAAACCTTCCGAGTCTTTTAATGAACCCTCAGAGACAGGA CATGGGAAGCATGTGGAGAATAAGGATATTACAGTTTCAGACATGGGAGAGAGCAGTATCATATCTAATATTTTGTCTTTGGAATTGGATGCATGGGAAG ATTCCTTAGTTAAGTTGTTGGATGAAAGTGGTAAACCAACTTTACGAAAAGTCCAAGACAAGAGCCAGTCAAGGTTCTCCTTTGCCAGACAAGATAATCT CACGAATGATGCATCTGATTTGGAGCAATCTTTTGGGATTGCTGGGAATGCTCCGAAAGGGAACTTTGCATCTGCTGGTTTAAAGGGAAACAAGGATACT CCCACTGGAAAATACCCACGTGTTTCCCCATCAAGCAATTCTACGCTGTTAGATAAATTTGTTGGAAGTCAGCCTTTTGTGCCTTCTAAATATTCTGCGT CAAATGCTCATGCTTCAAGCCCACTAGGATTTGCAATATCCAGCAGAGTACCTCCAAGGTTTTCACGTGGGAGAGTTGAACCGGATAACAGTTCTGTGAA ACATTTACAGCAGTATGCTCCTCCTTCTGGAAATATTAGCAGGATAAGGAATACTGAATTTAAAGATATTCCAGCATGGGGAGTTGGTAGTGGTATGCTG ACTGAAAGGCTGGGTAATGCATCTTTTGACCGGAATGACCTGAGGCAAACTTCACTTCCAAAATTTAGTCCCGGTGTAGATGATGCGAGACTTCAACTGT TAATGCAACAGTCGACGCCTCAGAATTTCGGACTCCCAGATCATGTTGGAAATATACTCCCCCCCCAAAATGACTCACACAGAACTTCTTCAAGGTTTCT TGATCAATTTCAGTCGAATAGTCCATCTATTATTTACGAACAATTGCATTCTCAACAGTTCAGTAGTACTGTTCTTCCTTCAAATAACCAGTGGGGTGGT TGGAATGACAAGAGCTTCAGTGGCCGGCGTATGTCAGAAGTATTGAATAATGAGAGGGGGGGATATAACAATTTCATGTCTAGTTAAAGAGTATATATAA AACTTTAAGCACCTGCTTTCTCTGATCTACTAGAACATTGTGGTGATTTTGTTTCAACTGTAATTTCTCTTCAATGCGCTAATTGGCCATCGGATATCAA GTCTATGGGAATCACATCTGTCTCCAAAATACCCAAGTCTTGATTTGGCTGAAATTGTGTTTTAGTTAGGCCATATAACAGTACCTTGAGATCACTTTCA AAATCAGTTTCGAATTCAAGTATCCTGAATCACATTCACAACTTTCTTATCAAATAGTCAATGCTAAATGTCAATCACTCTTGTTTGCTTAACTTCACAT GCTAGTAGTGGAATCTGGGTTTCTCCACATTATTGTTGGTAGATGCATTGTCTGATGTAATTTGTTAGTTTAACCAGAGGTTGCGGTGGCTGAGAAATCC GGTTATGCCGAGCTTACTGGAGAGGTGGCTCTGGCTGCCTGGGAAAGTGCCTTGGAGCAGTTCCAGTTGGCCTACCTCGACAAGGATCTCTCCTGGATGT CCATCAACTTTTATGTGGAGAATGAATATCTTCTTCCGGAGGAGGACGAGAATGTTTCCAGTTCCATACTCAAGGCATAGCTTGTAGGTTAGCTCGGGGT AGTGATGAAGGTTGAGCATGGATTTCGACCTTGTAATAGTTTAGATTTTGCAACTCTTTTTAGACTATCTATAAAGTTCATTTTTTCGGCTGTTTTGTTG ATATATCATGCTACTCCGAGTACCAATTGTCTTGACGACAAACCTAGTAATAATTACAATTAACTTTGAGTGACTCAATCATTATGATATTTGAATGATC GAATAATTAATTTTTAACCATTTGAGAGGATCTTAATTTGAAATCCTTGCAAG
• Tissue: pods
• Gene name: LI_gene_147419;
• Additional information: details;

Expression of Ll_transcript_511770

FPKM

• PAB: 6.7
• PNAB: 5
• PS1: 7.5
• PS2: 9.3
• PS3: 12.3
• PW1: 5.4
• PW2: 6.3
• PW3: 6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511770

• Blastp: -
• Blastx: CCR4-NOT transcription complex subunit 4 from Homo with 41.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002474)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443044.1)
• Pfam: -
• Rfam: -
• GO: -