| Id Trinity | TRINITY_DN46820_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_511771 |
| Sequence | TGAAGCCTCACATACTATACTAACACATACTTGGTGACTAGATTAATCATTTATCAACTTAGGACAGAAATCTTGTAGAGAAATTAATCAAAAGTTAAAA TGGCCACTTGTACAAATCTTCTAGAGAAATTAGTCAAAAAAGGTTAAAATGACCATACAGTCGAAAAGCGAATCTGGTTTCAACTCATGGGTTGTTTGTT ACGTACACATACAATCCTCATCTCTGTCTCTTTCTCTATATAACATTGTGCTTTATCCATATATCTATCTCTCTATCTTCATTTCTCTTCTTCAATCTCA CCCCGAAATTCCATGACAAACATGGGTGACAAAGGAGAAAAATCATGTCCCATATGCACTGAAGAGATGGACCTGACTGATCAGCAGCTGAAGCCATGCA AATGTGGCTATGAGATCTGTGTATGGTGTTGGCACCATATAATAGAAATGGCACAAAAGGATGAAACTGAAGGCCGTTGTCCAGCCTGCCGTTCACCTTA TGACAAAGAACGTATTGAGGCAATGGCAGCAAATTGCAAAAGATTAGTTGCCGAAATGAACTCGAAGTATAAAAGGAAAATGCAAAAGTTGAAGCCCAAG CCATCAGAAGGAAGGAAACATCTTACTGATGTTAGAGTCATTCAACGCAAACTAGTGTACATAATTGGTTTACCTCTTAACCTTGCACATGAAGATCTAC TTCAGCAAAGGGAGTACTTTGGCCGGTACGGAAAGGTTTTGAAAGTGTCAATATCCCGTACCGCAACTGGCATGATCCAACATTCTGCAAAACACAGCTG TTGTGTGTATATAACTTACTCAAAAGAGTCCGAAGCAGTCCGGTGTATACAATCAGTGCATTGTTTTGTATTGGAAGGTAGATCCTTGAGGGCTTGTTTT GGAACCACAAAGTATTGCCATGCATGGTTGAGAAATGTGGTAAAATAGTCACTTTAAGCTGATTAATATGAATGTTTTTTTACACAACTTTGCCTTTGTG TTATATTAAATTATAAGGTTTGTCCAGCCTTGCAGCAATAGAGATTGTTTATACCTACATGACTGTGGTTCTCAGGAAGATAGCTTTACTAAAGATGAAC TAATGTTAGCATTTGCAAGGTATGTTGCTTCTCAACTCATGTACCCCATCAGTCTGTTTAACTTTTGAAACTTCTGTCTTCCTTAATAAGCATCAGCTGA TCGTCTTTTATCTATATTGTTTCTTCATTTAGAGTTCAAATCCAAAGTTGCAAATCAATGTCTCTTTGTTTGCAATTTTGTAAAACCGACAGATTAGTTA AACATACATATCATACTGTCAGTATCTTACTCAAATGCATCATTTAGTTCTCTCCCTAGTTTCCATAAATATCCCACAGTTATTGGGTTTGTCCTAATTT TATTAGTTTTTTTATACAACAACCAAGCCTTATTCATTTTTTGTAGTCCTCCTTTATGACCTGTTTTTATTTATTTTTTTCATTGCTTTCACCTCATCAT GCTTGTTTAGACTTTCTCTATATCATGGTTTTTCGAATCTCATGAATCATGACTTCATTCATGCGATTCAATGGAAGTCTTATCTGCTTGATACAGATTG TGTGGAGTGTTGTTATGTTACCAGAATAACATGTTGAATTGCGGGAACTGCATGAACTGCAATTCTGCCCTGATTCTGAAGACACATATCTCTAAGGGAT ATCAAGCCAAACATCACTGTTGGGAAACCAACAAAGGTCATGATAGTTTGGTGTGGCCAAATCTTGTCGATAGAGAGTTCTGTGAAGAAGGCAGCTGGAA ACAGGTTCAGGCACACCACTAATTGCTGCCCAGATATATAGATACAGTGAACCAGCAATCACTGTGTAGGGACATAGGGTTTTCTTGATAGGTTTTAAAA ATTAGAGAGATAAGAGTATGGAGAACCCTTGTAATTAATGTACAGAAAATAAGGAAACAAAAATATAAGGAAAATATTGTATATAGAAAAGGGAAATAAA AATATAAGTAAACTAGTATGCATATAAAAGGAAATCAGAAAATCATCTATTTCTTACTTTTGTAGTTTTATTATGAAAAAATATATTCTGTATTAGTTTT AGTGATTAATTGTGTATCTTATGATTAACGATACATTTTAATTCTTGATTCAGACAATAAGAATTCTGATTTGTGATTCAATTTCTCTTATCAACTACAT TTTATTGTTTATGCTTGGTAGTTGTATGGTCTTTGATTATATTTTTGTTGTATTGTATTTTGGATTTTACAGGAGTAGGGTCCAACAAATTATTGGCGCT ACAAATAATTTGAATCGTCGTTCAGGCAGCGTTTTACCACCGCCTGCAGCTGACTCTAGACATACGTCATCAGCGACCGATTTAGTTTCTGGAAGTCCTT CGGAAAAAATTGAGAACCAGATCAAAGGATCCTGTTCTGGTATTGGAGCAGACATTTCAGCAGCAATTCCTGCAGTGACCTCTTGGATTAGGTGTGTATC TGGCAATCTTATACAGGATACAAATTTGTCATGTTCTGGTACTCTGTTCAATAGAAAAGTTGAGGCATCTAATGACCCACAAGCCCTTATGTCAGAAGTT GCTTCCACTGAAAGGTCTGATCTTAATAGTTCAGGGGAAGCTGAAAATAGCTCTGAGATGGACTCTAATGCTTTTACGGGCAATGATCAAGACATGGTTG CATCCTCTGAAAGCACAAGCTCCAGTAACCATTGTGATTTCGACATTGACAAAGTTGTGAGCGTTGATTCAAATAAGGATGTACAGGGCTTATGTTCAGG GTTATCATCTGTTAGCATGTGCAGTCCACTCGAAGATTCATCTTTCATTCCAGATTCAGTCAGATTACATTATACCCATAACTCAATCAACTCTTCTATA GGGAAAAGTTTGTGGCAAGATAATGAATATTCATATTCGAAAGAACATTCAACCACACCAGCTTTCTGGGAAGACATTGTTGTCGAAGATGTGATAAATA TAAATCGCGACCAGCAACATTTTAGCAAAGGAATCAATAATGTATCATCTGGGCTCTGTTCATCTTGTCTGCCTCAGAATGTGAACCAATCAAGCCATCA ATTGTGGCCACAAAAACAAGAACAAATTTGTAACCATTATCAGTTGGTTAAACCTTCCGAGTCTTTTAATGAACCCTCAGAGACAGGACATGGGAAGCAT GTGGAGAATAAGGATATTACAGTTTCAGACATGGGAGAGAGCAGTATCATATCTAATATTTTGTCTTTGGAATTGGATGCATGGGAAGATTCCTTAGTTA AGTTGTTGGATGAAAGTGGTAAACCAACTTTACGAAAAGTCCAAGACAAGAGCCAGTCAAGGTTCTCCTTTGCCAGACAAGATAATCTCACGAATGATGC ATCTGATTTGGAGCAATCTTTTGGGATTGCTGGGAATGCTCCGAAAGGGAACTTTGCATCTGCTGGTTTAAAGGGAAACAAGGATACTCCCACTGGAAAA TACCCACGTGTTTCCCCATCAAGCAATTCTACGCTGTTAGATAAATTTGTTGGAAGTCAGCCTTTTGTGCCTTCTAAATATTCTGCGTCAAATGCTCATG CTTCAAGCCCACTAGGATTTGCAATATCCAGCAGAGTACCTCCAAGGTTTTCACGTGGGAGAGTTGAACCGGATAACAGTTCTGTGAAACATTTACAGCA GTATGCTCCTCCTTCTGGAAATATTAGCAGGATAAGGAATACTGAATTTAAAGATATTCCAGCATGGGGAGTTGGTAGTGGTATGCTGACTGAAAGGCTG GGTAATGCATCTTTTGACCGGAATGACCTGAGGCAAACTTCACTTCCAAAATTTAGTCCCGGTGTAGATGATGCGAGACTTCAACTGTTAATGCAACAGT CGACGCCTCAGAATTTCGGACTCCCAGATCATGTTGGAAATATACTCCCCCCCCAAAATGACTCACACAGAACTTCTTCAAGGTTTCTTGATCAATTTCA GTCGAATAGTCCATCTATTATTTACGAACAATTGCATTCTCAACAGTTCAGTAGTACTGTTCTTCCTTCAAATAACCAGTGGGGTGGTTGGAATGACAAG AGCTTCAGTGGCCGGCGTATGTCAGAAGTATTGAATAATGAGAGGGGGGGATATAACAATTTCATGTCTAGTTAAAGAGTATATATAAAACTTTAAGCAC CTGCTTTCTCTGATCTACTAGAACATTGTGGTGATTTTGTTTCAACTGTAATTTCTCTTCAATGCGCTAATTGGCCATCGGATATCAAGTCTATGGGAAT CACATCTGTCTCCAAAATACCCAAGTCTTGATTTGGCTGAAATTGTGTTTTAGTTAGGCCATATAACAGTACCTTGAGATCACTTTCAAAATCAGTTTCG AATTCAAGTATCCTGAATCACATTCACAACTTTCTTATCAAATAGTCAATGCTAAATGTCAATCACTCTTGTTTGCTTAACTTCACATGCTAGTAGTGGA ATCTGGGTTTCTCCACATTATTGTTGGTAGATGCATTGTCTGATGTAATTTGTTAGTTTAACCAGAGGTTGCGGTGGCTGAGAAATCCGGTTATGCCGAG CTTACTGGAGAGGTGGCTCTGGCTGCCTGGGAAAGTGCCTTGGAGCAGTTCCAGTTGGCCTACCTCGACAAGGATCTCTCCTGGATGTCCATCAACTTTT ATGTGGAGAATGAATATCTTCTTCCGGAGGAGGACGAGAATGTTTCCAGTTCCATACTCAAGGCATAGCTTGTAGGTTAGCTCGGGGTAGTGATGAAGGT TGAGCATGGATTTCGACCTTGTAATAGTTTAGATTTTGCAACTCTTTTTAGACTATCTATAAAGTTCATTTTTTCGGCTGTTTTGTTGATATATCATGCT ACTCCGAGTACCAATTGTCTTGACGACAAACCTAGTAATAATTACAATTAACTTTGAGTGACTCAATCATTATGATATTTGAATGATCGAATAATTAATT TTTAACCATTTGAGAGGATCTTAATTTGAAATCCTTGCAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_147419; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_511771
| Blastp | - |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 4 from Mus with 40.4% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002474) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443044.1) |
| Pfam | - |
| Rfam | - |
| GO | - |