| Id Trinity | TRINITY_DN46826_c5_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_512683 |
| Sequence | ACTAGGACCTGGCCTGTGGCCACAACCAACCAAATGTCACTAGTTGTAGCACATGATAAGATTGTGTCCCTAATTAAGGTTGTGAAGTGAGTAAGAAGAA GATGTTAGATGACTAACACCAAAACACAATGACAGAAAAAGAAAATGAAGAGGTAATGCCCCTCCTCACCCCATACAACATGGGAAACTTTAATCTATCT CATAGGATAGTATTAGCACCGTTGACAAGATCGAGATCTTACAATTTCGTGGCTCAGCCACATGCTGCATTATATTATTCTCAAAGAACAACCAAAGGTG GCTTCTTAATTGGAGAAGCCTCTGGGGTGTCTGAAACAGCACAAGGGTACCCTAATACACCTGGAATTTGGACAAGAGAACAAGTAGAAGGGTGGAAACC AATTGTGAGTGCAGTTCATGAAAAAGGAGGCACATTCTTCTGTCAACTTTGGCATGCTGGAAGAGTCTCTGATCATCGTAATTTAAATAAAACTTTACTA TGAAATTTTCATCAAAATATACAAGTATAGTGTGTGACAGATCTTGAAATATACAATATTATAATTTTTAACAATCATATTTTGATATATGGAAATATGG AATGGCATAAAGTGTGAAAGTGTGGATAAGTGATGTTCTCCTTTCACCAAAAAAAAAAACTACATGATACATTTTTAGATCAAGCCAACGTTGGATAATT TTCATTTTTATTTATTTACTAGATTTTCACACATGACATGTGATAAATAAGAATATGCTTATATGCACACTATATTTTTTGTCAACAGTTACCATGCAAA TTCACACTATGTTTTGTGTTCATCAAGTTCACCATATAACTGTATATATGTACTTCTCTGTAATTCAGCATGAAAATTCATTCTTCACATCTCATTTCCA ATGCAAAATACACTGAATGTACACTATAAGCATAAGATACACGTTCATCATTACTTATTTGCTTATAAAAACGACATGTACAATTTGATGTATGAATATA TTCTTCCAAATAACACTCAAGTCTTCATTTTGTTCAGGTTTCCAGCCTCATGGACAAGCACCTATATCTTGCACAGACAAGCGAATTCAGAAAGATATCA GCAACAGTGCTGCTGCAACTAATAGATACACACCTCCTCGCCGTCTTAGAACCGATGAAATTCCCGAGCTTGTCAATGACTTCAGAATTGCAGCCAAAAA TGCCATAGAAACTGGTATTATTTAATTGAATATGAAGCATATGAATACATATAGTTATACAGTTTTTTGCTAGAAGTTATTATACAAGAATAGTATGAAA ATATCATAGAGAAGGGTCGTTCAACCCACGATACTTCTAACTAGTGGAGTTTGGGAATGATAGATATATACGGAATTAACATTGCTAGCGAAGAGGCATG AAAATACTATATGATCTTGTTAATAAAACAAAATAGTTGAACTACTTCATAGTATTAGTTGTTCCTCTCTCAAGTCAAGTTAGTTACATTTCACAGGTTT TGATGGAGTAGAGATACATGGAGCCAACGGGTACTTGCTAGATCAGTTCCTAAAGGACAAAGTGAACGACAGGGACGACGAGTACGGAGGCAGCATCGAA AACCGTTGCCGGTTTCCATTGGAAGTAGTGAAGGCCATAGTTGATGAGATAGGAGCTGACAAAGTTGGTTTTAGGCTCTCCCCATTTGCTGATTACAATG ATTGTGGAGACTCAGACCCTCAAGCATTGGGTATTTACATGGCTCAATCATTGAGTCAATTAGGCATTCTCTATTGTCATGTGATTGAACCAAGGATGGT TACACAGTTTCAAAAGTTTGACACCAAATGGTCTCTAATGCCAATAAGAAAGGTCTTCAATGGAACCTTTATTGTTGCTGGTGGTTACAATAGGAGTGAA GGGAACCAAGTTATTGCAAGTGGTGATGCTGATTTAGTAGCTTATGGAAGATTATTTTTGGCTAATCCAGATCTTCCTACAAGATTTGAGGTTGATGCTG AGTTGAATGAGCCTGATCCAAACACCTTTTATACACACGACCCTGTTATTGGATACACGGATTATCCATTTCTTCAAAATAATAGCTAGAGGCAATGGCC AAGGTTTAACTATTCATATTATGCTAGCATTATCAGTACATGAACATGCACATATAATCTATGAACTAATAATTTAGAAGGGGTGCCATATGGTATATGT ATAAATGATATAGATAAGGATTGAAGGGGTGCCATATAGTATATGTCTATATGTTGTTTTTATTTTACATGAAGTTGTAATAAATTATAAAATAATGTAT GACACTCAAATAAAAACGAAGAATGTATTTGCTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_147493; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512683
| Blastp | Putative 12-oxophytodienoate reductase 11 from Oryza sativa with 62.61% of identity |
|---|---|
| Blastx | Putative 12-oxophytodienoate reductase 11 from Oryza sativa with 68.02% of identity |
| Eggnog | NADH flavin oxidoreductase, NADH oxidase(COG1902) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449518.1) |
| Pfam | NADH:flavin oxidoreductase / NADH oxidase family (PF00724.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |