| Id Trinity | TRINITY_DN46830_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_513742 |
| Sequence | TGAAACTTGATTTCATCCATCCAGTGCTAATCCATTGTAGTGAAAGTAAAACAAAATTGGAGGATAGGTATGAAAAGTTTCAATTTGCATTTTGCTACAA AACCCTAACAAAAATCCAAAAGGAAAAGTCTAAATGGGAATGAGCATGGTTCCTCTCAGAAACCCAAATGAGGTTTTGTTATCTTCTTCTTCTATCTACC GCAAAGCCCCACTCTTTCCTCTCACAACCTCTGTTTCTCTCAACCCCACAACTACTTCCCCCAAACACCTCACGCGCCGCTGTTTCGGCTCCGTCAGATG CTCCTTTGCTCATGTTGACAACGCCAAGATTAAGGTTGTCGGCATAGGTGGCGGTGGCAACAATGCCGTTAACCGCATGATCGGTAGTGGTGTTCAGGGT GTAGACTTCTATGCAATAAACACTGATGCTCAAGCATTGTTACATTCTGCTGCTCAGAATCCTATTAAGATTGGAGAACTTTTGACTCGTGGATTAGGTA CTGGTGGGAATCCACTTTTGGGGGAACAAGCTGCAGAGGAATCAAAAGAAGCTATTGCCAATGCTCTTAAAGGATCAGATTTAGTTTTTGTAACTGCTGG AATGGGTGGGGGAACTGGGTCTGGTGCTGCCCCAGTTGTGGCCCAAATATCGAAAGAGGCGGGTTACTTGACTGTAGGTGTCGTTACGTACCCCTTTAGT TTTGAAGGACGCAAAAGATCCTTGCAGGCATATGAAGCCATTGAAAAGCTGCAGAAAAATGTTGATACACTTATAGTGATTCCTAATGACCGTCTGCTTG ACATAGCTGATGAGCAGACACCTCTTCAGGATGCTTTTCGTCTCGCAGATGATGTTCTGCGTCAAGGAGTACAAGGGATATCTGACATTATAACAGTGAG TTAATTTGCAAACAAGAAAGAGGGAACATAGAAAGCTTGAATCATTCTCTGACTCCTTTTCTCTCATGTGCTTTTCATTGGCCGTTCCTTGATAATTGGA CTTGTATTTAGGGGTAAACAAGGGTATTCCCAAAATTTTCTAGATCATATGAACTGCTGTGTGTTCTTGCAGATACCTGGACTTGTGAATGTGGATTTTG CTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCCTCCGGTAAAAACCGAGCAGAAGCAGCAGCTGAACAAGCCAC TTTGGCTCCTTTAATTGGATCATCTATTCAGTCAGCTACTGGGGTAGTGTATAATATTACTGGAGGAAAGGACCTTACCCTGCAGGAAGTGAATAAGGTT TCTCAGGTGGTGACAAGCTTGGCTGATCCTTCTGCTAATATTATATTTGGGGCTGTTGTTGATGATCGGTACACTGGGGAGATTCATGTGACTATAATTG CAACAGGCTTCTCCCAATCTTTTCAGAAGAAGCTGTTAACAGATCCCAGAGCTGCAAAGTTGCTTGATAAAGTGTTAGAGAGCAAAGAAAACAAGGCAAA AATGGTGCCCCCTCCCTTCAACTCCTCAGCCTCACCTTCAACACTTGAATCTAGACCATCCCCACCAAAGCTCTTTTTTTAGTTGCTTACTTCTTTTATA CCCACCCTTCTCTTTTTTCTAATTATTTCTTATGTGTAGTCATTCAGGTTTCTAATCATCCTGAACCTTTTGATTTATTCAGATGATAATCTCTTTATGG TCTTTTCCCTTTCATATGAAATGTTATTGTCAAACTCGCATTTTAGTTTTCTTCAAGTTATATATATATATATATATATATATATATAGGTAGATGAGGG ATCAATTTATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_147512; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513742
| Blastp | Cell division protein FtsZ homolog 1, chloroplastic from Arabidopsis with 81.14% of identity |
|---|---|
| Blastx | Cell division protein FtsZ homolog 1, chloroplastic from Arabidopsis with 71.98% of identity |
| Eggnog | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (By similarity)(COG0206) |
| Kegg | Link to kegg annotations (AT5G55280) |
| CantataDB | Link to cantataDB annotations (CNT0002616) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435652.1) |
| Pfam | FtsZ family, C-terminal domain (PF12327.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |