Ll_transcript_511554

• Id Trinity: TRINITY_DN46836_c13_g1_i1
• Name Transcript: Ll_transcript_511554
• Sequence: CTTTTAGTCTTTTACACAACACTCTTTGATTTGCTTGGGATTTCTCAGGTGCTTGTTCTCTATGAGCTCAATCCCATATACATATAGTCCAATCCTACGT CTCTTGCAGGGATGCTTCAACTTAACCACGAAATTGGTGAAGCAAATCCACGCTCACGCAATTACCCACGATTTATCTCGTTTTTCCTACGTTTCCAGCA GAATCCTCGCCTTCTATTCTCAATCCCCACGAAATGATTTTCGCTACGCAGAGACCCTTTTCACTTACATTTCCAACCCCAACGTCTTTGATTGTAACTC CATCATAATGGGTTTCTCTAAAAACTCACAGTTTCATAAATCATTCTTCGTTTTTAAACAAATGCTCAACATTGGTGTTCGTCCTAACTCTTGTACTGTG ACTTTGCTTGTTAAAGCGTGTTTTTCTTTATCTTTGCTTGAACAGGTTCATGCCCAGATAATAAAGTTGGGAACTTTATCAGATGTTTATGTTGTTAGTT CTGTTCTCAGTGTGTATTCCAAGTGTGGAGCGATTCGAGTTGCTCGACAAGTGTTTGATGAAAGTTCTAACAAGAATGTGGTTTGTTGGACAAGTATCGT CACTGGGTATTGTAGTAATGGGCTGGTTATTGAGGCGAGGGAGTTATTTGATGCAATCCCTGAGAAAAATGATGTTTCGTACAGTGCGATGGTATCTGGT TATGTTAGGAATGGTTGTTATAATGACGGAATTGAGGTTTTCCGTGAGTTGAAGAATTGCGCAAATGTGAAGCCTAATGGCTCTCTTTTGGCCAGCGTTC TTAATGCTTGTGCTGCTGTGGGTGCGTTTGAAGAAGGGAAATGGATTCACTCATATGTTGACGAAAATGGTTTTGAATATGAGCTTGAGCTTGGCACCGC GTTGATTGATTTCTACGCGAAATGTGGATGGATGCATCCTGCTGAGAAAATTTTTGATAGTATGCCGAGTAAGGATGTTACTACTTGGAGTGCTATGATC ATGGGTTTGGCTATTAATGGGAAGAATAAAATGGCTCTTGAGCTGTTTGCCAAGATGGAAAAGGTTGGACCTAAGCCAAATGCAGTTACTTTTGTTGGAG TTCTTACTGCTTGCAATCATAAATATTTGTTGAGTGAAGCATGGTGGTTATTTGGACATATGAGTAAAACATATGGCATCACACCATCCATTGAACATTA TGGATGTATGGTTGATATTTTGGCCCGAGGAGGAAAAATTAGCGAGACCTTAAGTTTCATTAACAGCATGCCAATTGCACCAGATGGAGCCATATGGGGT TCTTTGCTCAATGGGTGTTTGATGCATGGCCATATTGAGTTGGGACAAAAAGTTGGGAAGTATTTGATAGAAGTTGAGCCTCATCATAGTGGAAGGTATA TCCTTCTGGCAAACATGTATGCAAGTATGGGTAGGTGGGAAGGCGTTTCCGAGACAAGAAAATTGATGAAAGACAGGGGAGTGCCAGTCATTTCTGCTTG GAGTTTCATAGAAATTGATCGAAATATCCACAAGTTTGTTGTGGATGATAAGTCTCGCTCTTATTCAAGAGAAATATATGAAATCTTAAGTCACCTGGGA AATGAACTGAATGATTTTTCTATAGCAAAGGATGTTCTTTTAGTCTAAGTAGTGTAACTTCATCAGCTGAGATTTCAGGCTTAACTAATATATGCACTTT AGTACATGTTCAGGGTAAATATCCGCATTTGGTACAATGACAGAATGTCCAAACTAAGAAAATCCATGCATGCTTCATTTCCGGCGGTGCTCTTCCTACT TATCTGTGCATTCTGCAATTCAGTTTGGCTTCTGAAATTAAAGAAGTCATTCCTTATTTCTCCGACATGTCTACATTGAGCAAAAATTGCTTTTGGTACA GTCGGAAATTTAAAAATGGAATGTTTGTTTATTTATTCGAACAGTTTGCTGGCAGAAACTTTTCAGCACCTGGGGTTGGTGGCTTGTGCCTTCGCTCAAA ATGGAGTACTGCTAGCCAAATTGTGAAAAGGTGGGTATTGTTGTGGAAATCAATGGTTTATAACTAACTAAAATGTTCACTTTCTTGTGCTCAATGCCTG AGATTACTTTCTGTCCAACATATTATACATCATTTGGGAGCACACAAGGTGACTCCTCTTGTTCTTTGTTCAACTAATTTTACCTTCTTCAAGATGAAAC ATTGATTTAGGTCATTTATATTTCAAGAGGGTGAGCCTAGGCATAACGATAAGGTTGCTTGTCTTGTAACCTGGAGGTCATGAGTTCAAATCTCGTAAGC AACATCACTTATGAGAGTAAGGTTTTGTATGTCTACCCTCCAGACGGCCAGACCTACTAAGTAAGAACCTCATGCCCAGGGCCGACCTTATACTACCATA GCAGCTGTCCTCACTTTAATCAACCTTCGTTGGTTTGTAATCCAACTCCTCAAATTGTAGCTTAGTACAGGATCCATTTGATGCAAGAGGAAAACTGTAT CCATTGGTTCCAAGTTTCACCACATGAATGTGTAACGGTCCAACCAACCATCCAGAATTGCTCAGAAGATTACATGCGCAAGTCAAAATGAAGATTACAC TAGAGCCGAAGATTTTGGTATACCTTGCCATCCTTTAACTGTTTTTTCAGATTTGGAAATCAAATTCTGTGAATTGATGTTTGAATCTTGTCTCTACAAA AAAAGTGAAAAATGATAACTATACAAACACTAATACATTTAAATTGCATTTCGTAATTATAATTATAGTCAGAATATTATGGTTTCGTGAGTCTTCGCAG C
• Tissue: pods
• Gene name: LI_gene_147574;
• Additional information: details;

Expression of Ll_transcript_511554

FPKM

• PAB: 0.3
• PNAB: 0.7
• PS1: 1
• PS2: 0.4
• PS3: 0.7
• PW1: 0.5
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511554

• Blastp: Pentatricopeptide repeat-containing protein At5g66520 from Arabidopsis with 38.4% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g66520 from Arabidopsis with 38.16% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G66520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416127.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;