Ll_transcript_512699

• Id Trinity: TRINITY_DN46840_c0_g1_i1
• Name Transcript: Ll_transcript_512699
• Sequence: CTATACTAAACTTTTCTTTTATCATTTTGTTTATGCTAACTAAGAAAATTTATCTTTTACTTGCACTCTAATCAAACCTTGAAAAGCTAAATGGCAATGT CATTGATAATCAAGTAGCAATATTGTAATTGTGGATCCAAATTCCAAGTATTACTTACAACCCAAAAAACCATGCTAAGGAAAAGTGTTAATCTTAGTAA AAGGAATGTTCTTGTGATGTAATAACAAATTTATTAACATGTAAAAGGAGGAAGAAAATATGAAAAGATGTTAGACATGTATGGTCAGTTCAGGCATAAA GAAACTCAAACTTGGTGTCTTTATACTAATTGACTCATAAGAGGGTACCATAAATCCAAAGCTGAAAGAAACAGAACACTCAGATTGATCATTCACCTTA ACAATATTGATTTAGTGTGTCCATTTCAGAACAGCATGTAAGAGAGATCCTTGAATTTTTGTGTGAAGAAGCCAACAATTTTGTGATAACTCATCACTCA AACACCCCATGTTGGATCCTCCTTATTTCATGAACTATGTTTTGTCTAAGTCACTTTGCTCTTTCCTTTGTTTTTCTTAGTTAAAAGCTATTTTACTTCG ACAAAAAAATCTAGAGCTTTTGCATTCTGTGAATCTGGTTTCAGCTTTGAAGCATGTGGGAATCAGGGAGTGAAGCAGGACAGGAATATGGGACTGGAAT TCTCACTTCAAGCAAGCATAGTGTCAAGACTGAAGGATTTGTTCAAAGAGGCCACTCTTGGTATGTTGCCACTGATATTCCAAGTGACTTCTTAGTTCAA ATTGGAGAAGCTAACTTCCACTTGCACAAGTATCCTTTGCTATCTAGAAGTGGAAAGCTGAATAGAATCATAAATGAATCAAGGGACCCTGATTTGAATA AGATAGTTATGGATGATATCCCTGGAGGGCCTGGGGCTTTTGAACTTGCAGCCAAGTTTTGTTATGGAATTGCTGTTGATTTAACAGCAGGTAATATCTC TGGCCTAAGATGTGCTGCTGAGTATCTTGAAATGACAGAAGACTTAGAAGAAGGGAATCTAATATTCAAGACAGAAGCATTCCTCAGCTATGTTGTTTTG TCTTCATGGAGAGACTCCATAGTGGTGCTGAAAAGCTGTGAGAAGCTCTCACAATGGGCTGAGAACCTTCAAATTGTTCGCCGGTGCAGCGAGTCCATAG CTTGGAAAGCTTGTGCTAATCCAAAGGGTATAAAGTGGTCCTACACTGGAAGAACAGCAAAGATTTCAAGTCCAAAATGGAACAACAATGTGAAAGATTC AAGTCCGAGTATGAACAATCAGCAGGTTCCTAATGATTGGTGGTTTGAAGATGTTTCGATCCTTCGGATTGATCACTTTGTCAGAGTCATTACTGCTATC AAGGTAAAGGGTATGAGGTTTGAATTGATTGGTGCAACAATAATGCATTATGCAACTAAATGGCTACCAGGGTTGATAAGTGAAACATCAATAACACAAG GTGATGAAGCAAGTATCAGCAGTATTAGTAATAGTAGTACTAGTACTAGTGGTGGTACTTGCTGGAAAGGTGGACTTCATATGATTGTGTCCGGAAACAA AGATGAGAGTTCAAGTGTGCAAGCTAAGGAACAAAGAATGATTATTGAGAGCCTCATAAGCATTATTCCACCTCAGAAGGACAGTGTCTCATGCAGCTTC CTTCTTAGGCTATTGAGGATGGCAAACATGTTAAAAGTTGCACCAGCACTAGTTACTGAATTGGAGAAAAGGGTTGGAATGCAATTTGAGCAAGCTACAC TTGCTGATCTTCTTATCCCTTGTTATGAAAAAAGTGAGACTATGTATGATGTGGATCTTGCTCAGAGACTAGTGGAGCATTTTCTTGTTCAAGAACAGAC TGAAAATCCAAGTACACAATCATTCTCTGAAAATCAGATAGGGGGTAGTAATGTAAATGCCAAGGCAAAAGTGGCAAGGCTTGTTGATAGTTATCTTACT GAGGTGTCCAGGGATAGAAACCTTTCCCTCACAAAGTTTCAAGTACTTGCTGAAGCTTTGCCTGAGTCAGCTAGGACCTGTGATGATGGACTTTATAGAG CAATTGATTCCTATCTTAAGGCACATCCAACACTATCTGAGTATGAAAGGAAGAAACTGTGCCGAGTAATGGATTGTCAGAAACTGTCCATTGATGCATG CATGCATGCTGCACAAAATGAAAGGCTTCCATTAAGGGTAGTTGTACAAGTTCTATTCTCTGAACAAGTCAAAATCAGCAATGCAATAGCCAGCAGTTCT GTGAAAAGTGTTGACTCTCACACTCAGCCAATGGTTATAAACAGAAAAACACTTCTTGAAGGGACACCATATTCATTCCAAGAAGGATGGGCAAATGCTA AAAAAGACATAAACTCACTCAAGTTTGAGCTAGAGAGTGTGAAAACCAAGTACTTGGAGCTTCAAAATGATATGGAAAGCTTGCAGAAACAATTTGATAA GATGATGCTGAAGCAGAAGCAAACATCAGCATGGAGCAGTGGGTGGAAGAAACTGAGCAAACTTACAAAGATGACTAATGTAGAGAGCCATCATGGTCAT GGTCATGGTCATGGTCTTTCAACTAAGGTTCCAATTTCTGAAGAACAGAACAGAAAGACTACTAGAAGGTGGAGAAATTCTATATCCTGAGAAAGTTGAA GAATTAATATTGAATAATTAGTTCTCTATTTCTTTGAAACTCACTTTTCTGTTTGGTTATATTTCACTTATCTTCTTCTTTTGAACAGTAAATTAATAAG GCTTCAAGTTCTACATGATTCTTGTTCTAGCTAAATTGTAATTTGTCATCAAAGTTAATCATATTTTTCAAGCAAGTTCTATTGGCATTTCAACTATAAA TAGATGATGG
• Tissue: pods
• Gene name: LI_gene_147605;
• Additional information: details;

Expression of Ll_transcript_512699

FPKM

• PAB: 0.1
• PNAB: 5.6
• PS1: 2
• PS2: 0
• PS3: 0.2
• PW1: 5.2
• PW2: 1.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_512699

• Blastp: Root phototropism protein 3 from Arabidopsis with 68.06% of identity
• Blastx: Root phototropism protein 3 from Arabidopsis with 69.26% of identity
• Eggnog: cellular response to blue light(ENOG41110QX)
• Kegg: Link to kegg annotations (AT5G64330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418794.1)
• Pfam: NPH3 family (PF03000.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;