Ll_transcript_512112

• Id Trinity: TRINITY_DN46850_c2_g1_i8
• Name Transcript: Ll_transcript_512112
• Sequence: ATTTATTCTCACAACAAGTCTCTTGACTCCACTGTCGGTAGTGACACTCCTCCACCCTCTTCTTCTGTAAAATCAGTGTTAGAAACAAAATCACTATGAG CAGCATCGATGTTGTTTCTTCTAGGGTTAGGGTTTCAATCCCAAACAATATTCGCAAAACCATTCAACATATTAGAGAAATCACTGGCAAACAACACACT GATGATGAAATCTACGCTGTCCTCAGAGAATGTTCCATGGATCCCAATGACACTGCTCAGAAGCTTCTCTATCTAGATGCTTTTCATGAGGTAACAAGGA GACGGGACCGAAAGAAAGAGGGCTTGGGCAGTGAGGGTTTAGAGGATTCTAATTCTAGAATAAAGCGAGGACATGGGAGAAGGGGAAGGGTTGCTTCATC AGATGGTGGTGGTGGGAGGAAACTTGCAAGTCGTAGGGAAAATGGAATCCATAACATTACAGAGAGAAGTCGTGAACGCTCTAGTCAGCCAGGTTTACAG AAGATTAGAAAGAACCCCACATCTCAACCCATAAGAGCTTCAGTTGCATACAATGATCCCGTCAGTCAATCCAATGGGAATTCTGGTCATGGGTTTTCCA ATCAATCCATAGGTAGTGGCATAAGTGTCTCTAAAAGCAGTTCAACTGTTAATGACACTAACAATGCAGAAAATGTCCAGTCTCAAGTTACTGGTGTCAC AACCTCGTCCCTTATTCAAACCTGTGGCTCAGTTACCAGCATTGCCCAAGGAAAGCCACTATCAGATTCTGATAAACTTCTGCATTCTGTTTCTTCTGCT TCTGTACCTGGTGTCTATTCCTCTTTATCAGATCCTGTTCTGGCACCATCTATCTCCCAGAGTCCTGGCATCAGTAGTGCAATAAATAGAGAAGTTGGGA GTCAGTGCTTAAATTCTGGACCTGATCATGTTCAAGGAAACAAAATTGCGCTTCATGAAGTTGTTCATTTACCGTCACCCAAGAACAGAAAATCTGATTC TATGACATCTACAAGCAAAGATACGGCCCAAGATGAGTCGAATGAAGCTGAAAAGAATAAGTTATATGAAACTTCAAAGCTATTGTCCTCTTTATCGTGT AATGATTCTTTGAGGCCATCCTCTAGTTCCGGCAGTCAGCCACCTCCAGTTTCTGAAACAGTTAAGGCTGCACAGGCTTCCGATATTCACATGCAATCTT CAGCTGAGTTGAGACAACATGTTACGTTTCCAAACCATTTCCATGTACCTGAGACTTTAAAAGCTGGTCTGACATTTGGAAGCTTTGATAATTTTGGTCC AAGAGAAAGATCTAGCAGTGGAGGTGGTGACAATAACACCGATGCTGCTCTTAAATCTTCTCCAGGGAGTGATGAAACTGCTACTTATAGCAACCAAACT TCATCTTTGTCTTCCCAAGGAGATCATACTGAGCATCCACATTCTCCATCTAAGTTGATCGAAAAAACTCAAGCTTTAGGAAATTCTATAACTGTTGTTT CTGATTCAAATGATCAGCCAAAGCTGGAGGTACTGTTAGCTCCAGATGGCCTTCCAATTCATAATGTTCAAATTGCTCAAAACTATGGTTTGAATTTCAT GCCCACCATTTTAAGGACTCAGGAAGTTCGTTTTGAGGGAGCTGAGTCCCAGGCACAAGAAACATCCCACCTTCCTAACTTTGTTAGTGCAAGTTCTCAG ACTGTATCTAGCCCTAGCCCAACTCCACCTATGCAATCCTCCATTCCTGTATGTCCACATTCTATTCCAATTTTTAGGCCACCTTACCCTCCTAACTTCT TCCTATATGGCCACTACTATCCCCCAATTTATTTGTCACCGATGCACCAATTTTTGAGCCACAATGGCTTCCCTCCACAGCCATCTGTGGCCAACATGTA TCTGCCACCACCAGCTGCTGGAATCAAGTACCCTGTCCCTCAATTCAAGGCTGGAGCAAACACTGGAGCTATGGCACACACTGGAATTCCTCCTGCATCA TTTATCATACCACCTGCTGGATATGCTCCTAGTCCAACACTAAATACTGGAAACTCCAATGGCAATGAAGATCGTGCAGTGTCCCAGTCGAAGGAAAATC ACATCTATACAACTGGACAGCTGGTTGGTTCACTTCCTTATTGTTCTGTTTCAAATTATTATTCTGTTATTATGGGTCTGTGTTCAACAACATCCAGCTT ATTTTATAATTTAGAGTAGACCCTCAATTCAATCCTCGAAAGATCATAATGTCGCCAAATAATTCCTTAGCAGATTTGAGACATTGTCACATAAGTTACT AGCTGAAAAAAACTTTTGAAGACCTGTCTAGTGACATCATAATCTTCGAAGGACTGAATTGAGGGTTTGTTCTTGCAATTGATCAGTAAATCCATCCAAT TTCCAGGGTTTGTTGAAAGTTATTATACTTTTTATTGTTATTTTGGCAGAGTGAAGGCTCTGCTGTGTGTATACCTGCACCAAGCCAAGATATATCCAAC TTGCATGTTAATCCTCTGTATAACCTCAGCCCCCAGGGTCATTTTGTCTTTCCCCCAATACCGAGTAATCACGGTGCATTTGCTGGCGCTATCTATCAAC CAGGGCAAATGGTAGCTTCACCTTCAACCCTTTTGCAACAGTCTCAGGTAGTGGCCGGGCCTGTTGAAACAGTAGGCCCCCCTTCCAGTGCTTATCAGCA GCCTCAGTATGCACAGATCAATTTGAATTCTAATTCTTAGGCTTGAGAACATTTCTGTTGGCATAGCCTACAAATGCACATGGGATGTGCTTAAATCCAG GAAGTATCGAACACTGGCTAGATTTGAGTGTAAATAAGAATTGCGGCCGAAGAACAAGAAAAAGAAAGTTAGCACTCTTGGTGGAGATACTTCATCCTTA ATTATTATAAGGGGCATAGTTACATTTTTTAAGGTCTTGGTTTGTTTGCATTCTTTTACCCCTTAAAGAACATTTAGTTGTTGCTATAAGAAACTTAGTA TCCAAAGTGTTACTATAGGAAGCCAAGAGCTGAATAGAGTGGTGAGATTTATCAGTTTTTCCTTTTTGATATCTCACTTTGTTACATTTTGATAGCTTTT CTATTATACAATTCTATTTTAGTACTGTGCTCCTCTGATAGACAATATCAAATTGCTGTTAGACGAACAATGGCTTGGTCGACCTTCACAGATATTCGGG TCCAGATTCCCTGTCGTGGTGGTGGGAATGACATCTCGCTTTCCCTGGAATGCGATTTGCTTCCTGTTTATATCCAAACTACTGTCATCACTCGTTGCCT TCGAGCTGCTGCCACCAACCAATGACCAACGGCTGGATCTACCACCGCAGTATCCTAGTTGTGTCTATTGTTGTCATGGCATCTGATACTGTTCAGATGG TGGCGGTCGGAGGACCATATGTCCATGACTGAAGAGGTTTCATGTTGTAGGTGGCAACTGCAGTCCTGTTTGTTTTTTCATTTTCAGAAGCAATATTCAT TTTGTTTTTTTTTATTTTTTTTATGATGAGACACGTTCTAATTTTCAATCCAAAACACAGCAGGGAATCCAAATCCCACAACTTCTGAGAAAGTGTAATG CGTGTGTTGATCTCTTTTAATTCGTTAGTATTGATGGCTCAAAGGAACCAATATACCTGTCCTAATTTAGCTACTATAAATATTAATTTGTTCAAACAAC TTTGTACTCATTTTTGTAATTTACGATATAAAAACGATTCTTTTC
• Tissue: pods
• Gene name: LI_gene_147699;
• Additional information: details;

Expression of Ll_transcript_512112

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.4
• PS2: 0
• PS3: 0.3
• PW1: 0.2
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_512112

• Blastp: GBF-interacting protein 1-like from Arabidopsis with 46.43% of identity
• Blastx: GBF-interacting protein 1 from Arabidopsis with 43.18% of identity
• Eggnog: Protein of unknown function (DUF1296)(ENOG41104R4)
• Kegg: Link to kegg annotations (AT1G55820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447051.1)
• Pfam: Protein of unknown function (DUF1296) (PF06972.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;