Ll_transcript_513644

Id TrinityTRINITY_DN46854_c1_g4_i1
Name TranscriptLl_transcript_513644
SequenceAAAGTCGGTTCTTTCTTTCACAGTTACAATCAAATATCTTACGGAGAAAGAGAGAGAGAGAGAGAGAAGTTAGGGTTTAGCAATAGCTACGATTCGAGTA AGAGAGCGACGATGGATCCAGAAATCGCAAAGACGCAGGAAGAGCGTAAGAGAATGGAGCAAGAACTCGCATCACTTAACGCCACATCAGTAGTCTACGA TAGAGATCTCTACGGTGGAAGCGACAAAGATTCCTACCTCACTTCAATTCCAGCTAACGAAGACGACGACAATGTTGACGCCATGGACAACGAGGTCGCT CGCAAACTCGCCTCCTACACCGCGCCCAAATCGCTATTGAAGGAGATGCCCGGTTCCACTGGCTCCGATGCTGACGCTGAAATGGGGTTTCGGAAGCCAT CCAGGATCTATGATCGTGAAGATGAATATCGACGTAGAAGATTGAATCAGGTTATCTCACCGGAACGGCACGATGCGTTTGCCGCTGGTGAGAAGACGCC GGACCCGACGGTTAGAACCTATGCTGATATCATGAGGGAGGAGGCGTTGAAGAGGGAGAAAGAGGAAACTCTAAAACTTATTGCCAAGAAAAAGAAAGAG GAAGAGGAAGCTGAGAAATCCGCGCCTGAGAAGGATAAGGCTCAGAAGAGGAGGAATAGGTGGGACATGTCTCAGGATAATGAAGGAGCCGCGAAAAAGG CGAAGGCATCGGATTGGGACATGCCAGATAATGCTGCCACGCCTGGGAAGTGGGATGCTACTCCCACGCCCGGGAGAGTGATTGATGCGACTCCAGGGAG GAGAAACCGTTGGGATGAGACTCCAACCCCTGGGAGAATTGTTGATTCTGATGCCACTCCGGCCGGTGGTATGACTCCCGGTGCAACCCCTGCAGGGACA TGGGATGCCACACCGAAGCTTCCGGGCATGGCTACACCGACTCCGAAGAGGCAAAGGTCAAGGTGGGATGAGACACCTGCTACAATGGGAAGTGCAACTC CTTTACCAGGTGCAACACCTGCTGCTGGTTATACACCTGGTGTTACACCCGTTGGAGGGGTTGAGTTGGCCACACCGACACCAGGTGCGCTGCGTGGTGC TATAACGCCAGAGCAGTATAATTTGTTGAGGTGGGAGAGGGATATTGAAGAGAGGAATAGGCCTTTGACTGATGAGGAGCTTGATGCAATGTTTCCACAG GAAGGGTATAAGGTTTTGGACCCTCCTGCTTCATACGTGCCAATTAGGACCCCAGCGAGGAAGCTTCTTGCTACCCCAACTCCTTTAGGAACACCACTGT ATCAGATTCCAGAGGAGAATCGTGGGCAACAGTTTGATGTTCCAAAGGAAGCACCTGGTGGGTTGCCGTTTATGAAGCCCGAGGATTATCAGTATTTTGG AGCATTGTTGAACGAGGAGGATGAGGAGGAGTTGTCGCCAGATGAGCAGAAAGAGAGGAAGATAATGAAGCTTTTGCTTAAGGTGAAGAATGGGACACCA CCACAGAGGAAAACTGCTTTGAGACAGCTTACCGATAAGGCTCGCGAGTTTGGTGCTGGCCCATTGTTTAACAGGATTCTTCCTTTGCTTATGCAGCCTA CTTTGGAGGATCAAGAGAGACATCTTTTGGTTAAGGTAATTGATAGAGTTTTGTATAAGTTGGATGAGTTGGTCAGGCCTTATGTCCATAAGATTCTTGT TGTTATTGAACCCTTGTTGATTGATGAAGATTACTATGCCCGTGTTGAGGGTAGAGAAATTATATCTAACCTGAGTAAGGCTGCTGGGTTGGCCACTATG ATCGCAGCTATGCGGCCTGATATAGACAACATTGATGAATATGTGAGAAATACTACTGCTAGGGCTTTCAGTGTTGTTGCATCTGCTCTTGGTATTCCTG CACTGTTGCCCTTTTTGAAGGCTGTTTGTCAGAGTAAGAAGTCATGGCAGGCTCGGCACACTGGGATTAAGATTGTGCAACAAATTGCAATTTTAATTGG TTGTGCTGTTTTGCCACATTTGAGGTCTCTTGTGGAAATTATTGAGCATGGTCTGAATGATGAGAATCAGAAGGTGAGAACTATCACTGCACTGTCTCTT GCTGCTCTTGCCGAGGCTGCTGCTCCTTATGGTATTGAAAGTTTTGATTCTGTTTTGAAACCACTGTGGAAGGGTATCAGACAGCATCGTGGGAAGGTTT TGGCTGCGTTTTTGAAGGCAATTGGTTTCATCATTCCGCTGATGGAAGCCCTATATGCCAGTTACTATACTAAGGAAGTCATGATTATTCTGATTCGTGA GTTCCAGTCACCTGATGAAGAAATGAAGAAAATTGTTCTGAAAGTGGTGAAGCAGTGTGTGAGCACTGAGGGTGTGGAAGCTGATTATATTAAGAGTGAT ATCCTTCCTGAATTTTTCAAGAATTTCTGGGTTAGGAGGATGGCTTTGGATCGCCGAAACTATAAGCAGCTTGTGGAGACGACTGTGGAGATAGCAAACA AAGTTGGTGTTTCTGATATTGTTGCGAGAATTGTTGAGGATCTCAAAGATGAGAGTGAACCCTATAGGCGTATGGTTATGGAAACTATTGAGAAGGTGGT CACTAACTTGGGAGCTTCTGATATAGATTCCCGGTTGGAAGAGCTTCTGATTGATGGTATTCTTTATGCCTTCCAAGAGCAGACAAGTGATGATGCTAAT GTGATGCTTAATGGGTTTGGAGCAGTTGTCAATTCTCTTGGGCAAAGAGTGAAACCATATCTTCCTCAGATTTGTGGTACTATCAAGTGGCGGTTAAATA ACAAGAGTGCAAAGGTGAGACAGCAAGCAGCTGACCTTATTTCAAGGATTGCTGTTGTCATGAAGCAGTGTCATGAGGAACAACTGATGGGTCACCTTGG TGTTGTCTTATACGAGTATTTGGGAGAAGAGTATCCTGAAGTTTTGGGCTCAATTCTTGGAGCTCTCAAGTCCATTGTCAATGTTATTGGTATGACAAAG ATGACTCCTCCTATTAAGGATTTGCTTCCCAGGTTAACACCCATTTTGAAGAATAGGCATGAGAAGGTCCAGGAGAACTGTATTGACCTTGTTGGTAGAA TTGCTGATCGTGGTGCTGAGTTTGTACCAGCAAGAGAGTGGATGAGAATCTGTTTTGAGCTTCTTGAGATGCTTAAGGCACACAAGAAGGGAATTCGTAG AGCCACAGTTAACACTTTCGGGTATATTGCGAAAGCTATTGGACCACAGGATGTGTTAGCAACTCTACTGAATAATCTCAAAGTGCAGGAGAGGCAGAAC CGTGTCTGCACTACGGTAGCCATTGCAATAGTGGCGGAAACATGTTCACCCTTCACAGTTTTGCCAGCTTTGATGAATGAGTACCGTGTGCCGGAGCTTA ATGTGCAAAATGGTGTCCTGAAGTCTCTCTCTTTTCTCTTTGAGTACATTGGTGAAATGGGAAAGGATTACATCTACGCAGTGACTCCCTTGCTTGAGGA TGCTCTTATGGACAGGGATTTGGTTCATAGGCAGACCGCGGCTTCTGCTGTGAAGCACATGGCACTAGGAGTGGCTGGTTTGGGTTGTGAGGATGCACTG GTACATTTGCTGAACTTTGTCTGGCCTAACATATTTGAAACTTCTCCTCATGTGATCAATGCTGTGATGGAAGCCATTGAAGGAATGAGGGTTGCGTTGG GTGCTGCTGTTGTTCTTAACTACTGTCTCCAAGGGCTGTTCCACCCGGCTCGAAAAGTTAGGGAAGTGTACTGGAAGATCTATAACTCACTGTATATTGG TGCTCAGGATGCTCTTGTTGCTGCATACCCTGCTCTGGAGGATGAGCAAAGCAATGTCTACAGTAGACCAGAGTTGATGATGTTCATTTAGATTGCAGTT TAGGCTGTTGGGAACTGTCTTTAAGACATTTTGCAGTTGTTGGCGATGTCCATATTTGCAATAACTTATCACTTAAAACTATCATGATCTCATAATGCTA CGTTGTATGTTCATTAAAACTGGCCCATACTATAGCTCAGTGTGCATGACTGGGATTCCTTATTATCTGATGAGTTGTTATTTGTTTATTTTGTGTATGA TGTGGTCATTATATCTAATAGCACCTTTGGTTTGACAGAAAGGAATAAGACTTCTTATTCCCTCTTTGGTTGAGAATTAAGACAGGCAGTTCCCTAATTT GGAGGGGTTGGCACTACATAACAAAACTACAGAGTAGTGCCTTTCCTGGTCATAGCTCTCCTCCAGCCACATATTCTCTGCCTATAGGTTTGGCTCTCCT TATCTGATTATCTTGGATGAATTTTTTGTTGAGGGAGTTGAATGTTGCTCATGAATATTCACCCTCATTCTTTGATTGTCACTTTTCCCTCTGTAGGTGT TGAATTCTGATTCTTTTTTTGTAGGAGTTGGTTACTGGTATTGTTTCTGATTTTAGAATGATATCCAATTAGCTTTGGTGTTGTTCAATATAGTAAGGTT GTGTATTTTGACTGGAAGCTGATTGATAAAGTGTTTTATGTAATTCTTAAAGGAGGGTTACCAGGAACGTATACTTACTCATATTTGAGTGGGTTTTCAT TAGCAATATGAAGTTTTGATTCCCTACCAGAAAGTAAATACTAAAATGGAGTTCACCTGAATAATACTCTTAACTTCCATGTTCTTTTAATCTAAAGGGA AGGGGCGTTTCTACTTTTTAGAGCTTGTATAGTTTGCATTAGTTTTTCTTGATGTGTTATGGTTATACTTCTATATCCAATATTATATACATGTCATGAA TGTTTCTTGCAGAAAAAAGTTACTGTTTCGGGGCTAATGATTTTGGATTTACTTCTGTGAACTATATTCTGCCAATACAATCTGGTAGCATTTGTGATTG TTTGGTAATGTTTACATTTTCAGGCAAAGAGAATGAGGGCATTTAGAGTTTTACTACTTACTGATTGTACACCATTACTGGAGATCCTGTTGAGGAACTG CTTCAAAATAAGAAAGTAGTTTTGCAAACTCATGCTCTCAACTCTCAAATGGTGTTTCACCAACTATAATGTTCATGGCTAGCTTTCAATAATTGGAATA AGATCCCGTTTTATGAGTGTTTTTAACTGTAAATTTGACTCAAGTAATATAGATTGATATGGTTTGATTATAATTTAGATTTATCATTTGCATATTACAA GTAAAAA BLAST
Tissuepods
Gene nameLI_gene_147712; 
Additional informationdetails; 

Expression of Ll_transcript_513644

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_513644
BlastpSplicing factor 3B subunit 1 from Homo with 72.37% of identity
BlastxSplicing factor 3B subunit 1 from Xenopus with 68.7% of identity
EggnogSplicing factor 3b subunit(COG5181)
KeggLink to kegg annotations (23451)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440342.1)
PfamSplicing factor 3B subunit 1 (PF08920.9)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;