Ll_transcript_511866

• Id Trinity: TRINITY_DN46857_c3_g3_i2
• Name Transcript: Ll_transcript_511866
• Sequence: AATACTTTAACTTTTCCTACTAAACTTGTTCTTTCTAGGGAAGAGTAGGATATGCATAGTACAGCACTGAAAGAAGAATTTGAGCTTTGCGTTGTGGACA CTGAAAGGATCTCCAACTCTTTTATCTTGCAGAGCGGAATGATTCAGCTCCTGCATCTTCACCTTCACCTACTAATAGAGCATTGAAGCAGGTTTCACCT TTCAAAAACCAAGACAAAGTTTTGAACTATAAATGGCATTTGCAGAATCAAGTCTTCTTGTTTCCTTTGATGATGTGAAAGCTGCTGCTGCTGAGTTTGC TAGGGGATTTAACCACAATTACTTCCAACCCTTGCACATGGCAATATTAAAAGGTGATTGGGAATCTGCAAAGGCATTCCTTGATCACAACCCAAGTGTT TGGACAGCAAAGATCACTATACTTGGCCGGACTGCATTACATGTGGCAGCCGTAGGAGGTCAGTGGCAAATTGTAGAGAAGCTGGTGCAACATATGCCTG CAGAAGCCCTTGCAGAATTGGACTTCATGGGTTGTTCTTGCCTACACTATGTTGCAATGGGTGAGAGCATAGAGACTGCAAAGAAATTGGTGGCCAAAAA TCCTTCTTTGACACAAGTAACTGACTTTAAAGGATTCACACCACTCTTCTATAGTATTACCTCTACTATATGTAAAGAGATGGTGTGGTACCTTGCTTTG AATACTACTGATGAGAGACCTGGCTGTCCATTCTCCGGTCCTTCCACTACTCAACTCGTTGCCTTGCTTACAGCTGCAGGATTTCATGATATCACCATAT TCCTTCTCCAGCGGTATCCTGCCCTGGCCACCATTGTAGATTCAAATGGAAGCATTATACTCAACGTTTTGTCAAAAATGCCGTCCGGCTTTAAGAGTGG AAATAAGCTTGGGTTTTGGGGAAGATGCATTTACAATTGTGTTCCCGTGCCAGGTCAGTTGACAGGAGATTTGAAAGGTTCTTATGGCGAGTCAAGCAAT CACCAATCTTATTTCGGAGGTACAATATGGAACGCAGTTCAGAATCTTGTTCCTAGCATAAAGCTAGTCCGCGATGCAAAGTTGAGACATGTATTTGCAA TGAGATTGGTAGAATATGTTTGCTCACAAGTTTCAACCATGAATGATTCTCAATTCTGGCAGTCTTTTGTGAGTGCAGACATTATTTCCAGTGCCACATC CTCTGGCATAGTTGAAATGTTGAGGATATGTTTTCAGTTCTTCCCGGATTTGGTTTGGACTTGCATACCAAATGAAGGATATATAGCTCAAGTTGCGATC AAGAACCGACAAGAAAAGGTTTTTAGTATTTTATGTAAGATGCCGATAATTTGTAAGATTTTTATGTTGGTAGTAGATGAATCACAAAACACCACATCAC ATGTAGCAGCAAAGTTTGCTTCTCCTCAACTAGCCTCAATTTCTGGTGCAGCATTCCAAATGCAAAAGGAGTTACAGTGGTTCAAGGAAGTAGAGAAGTT GGACCACCCTCTCCATAAAGAAGTGAAAAACCAAGATGGTAAAACAGCTTGGCAATTATTCAGAGAAGAACACAAGACATTGCGCGAAGAAGGAGAGAAA TGGATGAAGGATACGACAAACTCTTGCATGGTAGTGGCAGCACTTATTGCTACAGTTGTTTTCGCTGCTCTTCTCACTGTACCTGGAGGTAACAACCAAG ACAAAGGAATTCCAATATTCTTGTCAGATAACACACTCATGTTGTATGTTGTCTCAGACGCATTAGCTTTATTTTCCTCAATGGCTTCTCTTTTGATGTT TTTATCAATACTAACCGCCCGTTATGCCGAAGAAGATTTTCTCAAGACATTACCAGAGAGATTGATACTAGGTCTGGCTTCTTTGTTCTTTGCTATAATA ACTACAATGATAGCATTTGTTGCGGCGCTTACTTTGGTGCTCCGGGAGAGAGTAAAATGGGTGTCAATTCCATTTGCTCTTCTGGCTTGTGTTCCAGTTG GTCTATTTGCAAGGCTTCAACTTCCCTTGTTTATACAAATGATCATATCTACTTATGGATCTCGCATTTATCATCCTCAGAGTCTTTGGTAAAGGCTTTT GTAAGGTTTTCCAGCACCACATTTAGAAGGCAAAGCAAGAAAAATAAAACCATATAAGCAGAGACCATCAGAGTTGCCTCCATTCACATGAATTATGATC ATTATGTAAGTATTGAAATTTCCTATATTGGATGACAACTACAAGGTATTTATAGTATTAGGCTATATATAGCATCTTCAGCTTTGGTAGCTCGAGAAGC AAAAGGCTATCAAGTTTGGATTTTGCGATTCTTCCATCTGATTCACATGAGTTGATTAAGGGGTTCTAACTACAATGGAGAAATTTGTTTGATAAAGAAT TATTTATTATGCTATTACTATTATAGTTTTTTGGGTACATATGTTGTGTTGTTTTGGATACATATTTTGTGTTTTTTGGGTACATATTACTATTATAGTT TACTAACAGAGTGCCTATCAA
• Tissue: pods
• Gene name: LI_gene_147744;
• Additional information: details;

Expression of Ll_transcript_511866

FPKM

• PAB: 0.6
• PNAB: 2.8
• PS1: 3.8
• PS2: 1.7
• PS3: 3.1
• PW1: 1.9
• PW2: 1.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511866

• Blastp: Ankyrin repeat-containing protein NPR4 from Oryza sativa with 23.05% of identity
• Blastx: Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C from Gallus with 31.06% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (4327365)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447107.1)
• Pfam: Domain of unknown function (PF13962.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;