| Id Trinity | TRINITY_DN46857_c3_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_511869 |
| Sequence | AATACTTTAACTTTTCCTACTAAACTTGTTCTTTCTAGGGAAGAGTAGGATATGCATAGTACAGCACTGAAAGAAGAATTTGAGCTTTGCGTTGTGGACA CTGAAAGGATCTCCAACTCTTTTATCTTGCAGAGCGGAATGATTCAGCTCCTGCATCTTCACCTTCACCTACTAATAGAGCATTGAAGCAGGTTTCACCT TTCAAAAACCAAGACAAAGTTTTGAACTATAAATGGCATTTGCAGAATCAAGTCTTCTTGTTTCCTTTGATGATGTGAAAGCTGCTGCTGCTGAGTTTGC TAGGGGATTTAACCACAATTACTTCCAACCCTTGCACATGGCAATATTAAAAGGTGATTGGGAATCTGCAAAGGCATTCCTTGATCACAACCCAAGTGTT TGGACAGCAAAGATCACTATACTTGGCCGGACTGCATTACATGTGGCAGCCGTAGGAGGTCAGTGGCAAATTGTAGAGAAGCTGGTGCAACATATGCCTG CAGAAGCCCTTGCAGAATTGGACTTCATGGGTTGTTCTTGCCTACACTATGTTGCAATGGGTGAGAGCATAGAGACTGCAAAGAAATTGGTGGCCAAAAA TCCTTCTTTGACACAAGTAACTGACTTTAAAGGATTCACACCACTCTTCTATAGTATTACCTCTACTATATGTAAAGAGATGGTGTGGTACCTTGCTTTG AATACTACTGATGAGAGACCTGGCTGTCCATTCTCCGGTCCTTCCACTACTCAACTCGTTGCCTTGCTTACAGCTGCAGGATTTCATGATATCACCATAT TCCTTCTCCAGCGGTATCCTGCCCTGGCCACCATTGTAGATTCAAATGGAAGCATTATACTCAACGTTTTGTCAAAAATGCCGTCCGGCTTTAAGAGTGG AAATAAGCTTGGGTTTTGGGGAAGATGCATTTACAATTGTGTTCCCGTGCCAGGTCAGTTGACAGGAGATTTGAAAGGTTCTTATGGCGAGTCAAGCAAT CACCAATCTTATTTCGGAGGTACAATATGGAACGCAGTTCAGAATCTTGTTCCTAGCATAAAGCTAGTCCGCGATGCAAAGTTGAGACATGTATTTGCAA TGAGATTGGTAGAATATGTTTGCTCACAAGTTTCAACCATGAATGATTCTCAATTCTGGCAGTCTTTTGTGAGTGCAGACATTATTTCCAGTGCCACATC CTCTGGCATAGTTGAAATGTTGAGGATATGTTTTCAGTTCTTCCCGGATTTGGTTTGGACTTGCATACCAAATGAAGGATATATAGCTCAAGTTGCGATC AAGAACCGACAAGAAAAGGTTTTTAGTATTTTATGTAAGATGCCGATAATTTGTAAGATTTTTATGTTGGTAGTAGATGAATCACAAAACACCACATCAC ATGTAGCAGCAAAGTTTGCTTCTCCTCAACTAGCCTCAATTTCTGGTGCAGCATTCCAAATGCAAAAGGAGTTACAGTGGTTCAAGGTTTGTTAATCATA ATAATAACCTTGGTACTAATTTTTTATTTCAATTACATAGTCGGTCCTGAGTCCAGATAAAAGATAAAGATTGTGTTAGGCAGTCGACAACCAACGTAAA AATTTGTCCAATATCTACCTATGATATAGAATTATCATATTGAAAACATGGCATAATGTCCAACAGGAAGTAGAGAAGTTGGACCACCCTCTCCATAAAG AAGTGAAAAACCAAGATGGTAAAACAGCTTGGCAATTATTCAGAGAAGAACACAAGACATTGCGCGAAGAAGGAGAGAAATGGATGAAGGATACGACAAA CTCTTGCATGGTAGTGGCAGCACTTATTGCTACAGTTGTTTTCGCTGCTCTTCTCACTGTACCTGGAGGTAACAACCAAGACAAAGGAATTCCAATATTC TTGTCAGATAACACACTCATGTTGTATGTTGTCTCAGACGCATTAGCTTTATTTTCCTCAATGGCTTCTCTTTTGATGTTTTTATCAATACTAACCGCCC GTTATGCCGAAGAAGATTTTCTCAAGACATTACCAGAGAGATTGATACTAGGTCTGGCTTCTTTGTTCTTTGCTATAATAACTACAATGATAGCATTTGT TGCGGCGCTTACTTTGGTGCTCCGGGAGAGAGTAAAATGGGTGTCAATTCCATTTGCTCTTCTGGCTTGTGTTCCAGTTGGTCTATTTGCAAGGCTTCAA CTTCCCTTGTTTATACAAATGATCATATCTACTTATGGATCTCGCATTTATCATCCTCAGAGTCTTTGGTAAAGGCTTTTGTAAGGTTTTCCAGCACCAC ATTTAGAAGGCAAAGCAAGAAAAATAAAACCATATAAGCAGAGACCATCAGAGTTGCCTCCATTCACATGAATTATGATCATTATGTAAGTATTGAAATT TCCTATATTGGATGACAACTACAAGGTATTTATAGTATTAGGCTATATATAGCATCTTCAGCTTTGGTAGCTCGAGAAGCAAAAGGCTATCAAGTTTGGA TTTTGCGATTCTTCCATCTGATTCACATGAGTTGATTAAGGGGTTCTAACTACAATGGAGAAATTTGTTTGATAAAGAATTATTTATTATGCTATTACTA TTATAGTTTTTTGGGTACATATGTTGTGTTGTTTTGGATACATATTTTGTGTTTTTTGGGTACATATTACTATTATAGTTTACTAACAGAGTGCCTATCA A BLAST |
| Tissue | pods |
| Gene name | LI_gene_147744; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_511869
| Blastp | Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C from Gallus with 30.86% of identity |
|---|---|
| Blastx | Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C from Gallus with 31.06% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (426469) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447107.1) |
| Pfam | - |
| Rfam | - |
| GO | - |