Ll_transcript_511813

• Id Trinity: TRINITY_DN46859_c3_g2_i2
• Name Transcript: Ll_transcript_511813
• Sequence: CTTAGTTTAAACCAAGGTGAGCTGTTGAGCGCTATCAAACATTTACATTTTATATGTGTGGTAAAATACTTTCTTAACTCTTTGACACAGGTTGAGTTAG TAGCCATCCTTTTTTCCTTGCATCTTGTAATATTTAGTATTTAAGAAGATCTCCGTTTTTCTTTAACTCTATATCCTTTGATGTGTTCATGATGTTGATT TATATAATTTGGTAGTCTCAACTGATGATGGCAAGTTCCTTCTTGCTGCACGCAAGTGCCGACGTGCAACTCACACAGACTATATCATCTCTCTAAACTA CGATGATGTATCAAGAGGCAGCAACACCTATATTGGGAAGTTGAGGTATTTTAGCTGATATTTAACATGACTTGTTAATCATAATTTTCTAGTCCTAAAA TTACTCTCATTCTCTCTTTTGAATAGATCCAACTTTCTAGGTACCAAATTCACAGTGTATGATGCACACCCTCCTATTTGTGGAGCCAAAGTTGCAAAGT CTCACTCCACCAGGCTAGTTAGTTCTAAGCAAGTCTCTCCGAGAGTTCCTGCCGGAAACTATCCTGTTGCACGTGTATCATATGATCTGAATGTTTTGGG TTCCAGAGGCCCCAGGATAATGCAATGTGTTATGGATGCCATCCCTGCTTCAGCTGTTGAACCCGGAGGTGTGGCCCCTACACAGACTCAATTTCTCCAT AGCAGAATTGATACTTCTCCATCTATCCCTTTCTTTAGATCAAAATCAACCCGCATTGAAAATCTCCAATCATTGCCTTTGACTTCTCAAAATGAGGGAA CACTAGTATTACGGAACAAGTCTCCTCGGTGGCATGAACAACTCCAATGCTGGTGTCTGAACTTCAATGGACGAGTAACAGTTGCTTCAGTGAAAAATTT TCAGCTGGTTGCATCTCCTAAAAATGGAGTTTCTGAGCAGGCTCAAGAAACTGTTATTCTACAGTTCGGAAAAGTTGGGAAGGACGTATTCACCATGGAT TACCAGTATCCGATCTCTGCCTTTGAAGCATTTGCAATATGCCTTAGCAGCTTCGACACCAAGATTGCTTGTGAATGATTGTCAGGTGATAGCCAGTGCT GCACAGTATTGCAGGTCAGATATTGGCAATTGATTTTCTGCTTTTCTCTTTGCTTCAATTCATGCTCTCCTCCCTCCCCCTTCTCAACTGTATATATGTT TGTTTTTGTGTGTATTATATCTAACCATCATAGAATTTATGCTCTGCTTTTGTGTCACTTTGTATATCACCTTTATTTTTTTTGCTTGACAACCTTAATT AGTTGCAATTGGTTTGTGAGATTTCAGTTGTTTCCTTTTGATGTTCTTGTTTTGCTGCAAAGAAATGCCAAAACTTTACGTTGGATGGGTAATTATCAAG TTACTCCAATAATGAGTCTAAAAGACTTACTCTGAATCTTAGTCGTCAATTTATTTGAAATTCAATGATTTAGATCTATTCATTAATTCAAACTATTGGA TTTCTCTAAAATTGATGGTTAGGATGAGAAGTAAATCTAAAAGACTTGCTCTTTGAGTAACTTGTTCCGTCCAAAAAAAATAACTCTCTTACCGGCTTAA GGTTAATTGGGGCAGGAACAAGTGCTAAATTCATGGGCATTTGACAACAAATTATAGAGTTTGTTGTAAGAGATAATATTCATGCAATGCCTGAATTTAG CTAGCTAATAAGCCTTTTGTTCCTGCTTGTCGATTATATATGTTATTATATACTTTTGTATCATAAAAGGGTCGCACTAACTTTTATTTTTGATGTTAAG GAAGAAAGTGAACAAAGAAAAGTGGATTATAATCTAAACTGTTT
• Tissue: pods
• Gene name: LI_gene_147762;
• Additional information: details;

Expression of Ll_transcript_511813

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.1
• PS2: 0.1
• PS3: 0.2
• PW1: 0.1
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511813

• Blastp: Tubby-like F-box protein 3 from Arabidopsis with 77.78% of identity
• Blastx: Tubby-like F-box protein 6 from Oryza sativa with 66.2% of identity
• Eggnog: tubby like protein(ENOG410XQFT)
• Kegg: Link to kegg annotations (AT2G47900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441787.1)
• Pfam: Tub family (PF01167.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;