Id Trinity | TRINITY_DN46864_c0_g1_i11 |
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Name Transcript | Ll_transcript_513346 |
Sequence | TCCTCTCATACCATAAATTATAATACCGAAAATGTCCCTATATTCTGACTCACCGGCGGGTTCTTCCGGCAGAGATTGGCTCTTCCCGTCGCCGTCGTTT CCGCGGTCGTCACAAACACCGCAATACCGCCGTCGATTCCAGTCAAAGCTACACACACAACCCCAACCTTTTCCACACCGCCGGCGCGTAGTTCAATTCT CACGCGCTCCAACTTCAATTCCAACCGTTTCTGTTTCCGATGTGGAGAAGAAAGAAAAATCGTTTTCCAAGAAGTACTACAACTTCATCTGGTTTTCGCA ATTTCGTTATCACTTCGCTCTTGTGATTGTGACTATAACGTTTCTGGTGCTGTTGATTTTCAGAAATATATATCTACAAAGCCAACTCAATAAGTTGCAG GGTGAGATTGTCAGCCTTAATCTCAGATTATATGCTTACCATAAGTTGGATCCCCTAAACATTACCAGTGCTACAATTCAGGACCCTAATACTTTTGTGA GTGGAAACTTCAAAAGAAATCTAGCACTTTTTTCCTCCTTCACACTTCTATTTATCCCTCTTACTATTTTCAAGTACATAGACTATGTATCAAAGTCAAG ATTGTCTGACAATATATCAGAACAAATTTCTCTAAAGAAACAAATAGCATATTGGGTTGATGTCTTTTTATCAGTTCACCCATATGCTAAGCCACTTGTT TTGTTAGTTGCAACACTGTTGCTAATTTTTCTTGGAGGATTGGCCCTTTTTGGTGTGACTCCCGAGGATTTAGCACATTGCCTCTGGTTATCTTGGACCT ATGTTGCTGATTCTGGCAACCACGCCAGCTCCGAAGGTATTGGTCCCAGGTTAGTTGCGGTTTCCATTAGCTTTGGTGGGATGCTTATATTTGCAATGAT GCTTGGGCTTGTATCTGATGCAATTTCTGAGAAGTTTGATTCGCTGAGGAAAGGAAAAAGCGAGGTGGTTGAACAAAACCATACTTTGATTCTTGGCTGG AGCGATAAATTGGGTTCATTACTGAATCAGCTTGCCATAGCCAATGAGAACCTATGTGGGGGAACTGTTGTAGTGATGGCTGAGCGAGACAAGGAAGAAA TGGAGCTTGACATTGCAAAAATGGAGTTTGACTTCAAAGGAACATCTGTCATATGCAGAAGTGGCAGTCCCGTAATTTTAGCTGATCTGAAAAAGGTTTC TGTTTCAAAGGCTCGTGCAATAATTGTCCTTGCTGAAGATGGGAATGCTGATCAGAGTGATGCCCGCGCTTTGAGAACAGTCTTAAGTCTAACTGGAGTC AAAGATGGATTACGAGGGCACATAGTGGTTGAGTTGAGTGATTTAGACAATGAGGTCCTTGTTAAACTTGTTGGTGGTGATCTTGTTGAAACTGTCGTAG CTCATGATGTCATTGGTCGGTTGATGATTCAATGTGCTCGGCAGCCTGGACTTGCACAGATTTGGGAAGATATACTTGGATTCGAGAATTGTGAATTCTA CATTAAAAGATGGCCGCAGTTGGATGGTATGCAATTTGAGGATGTATTGATCAGCTTTCCTGATGCAATTCCTTGTGGAGTCAAAGTTGCAGCACATGGT GGTAAAATTATTTTGAATCCAGATGACACCTATGTTCTACAAGCAGGTGATGAAGTTCTGGTCATTGCGGAGGATGATGATACCTATGCCCCAGTGTCCT TGCCTAAGGTTTGGAGGGGAAGCTTACCCAAGGACTTTGTTTGTCCAAAGTCTCCAGAAAGAATACTTTTTTGTGGTTGGAGGCGTGATATGGAGGACAT GATCATGGTAATGCTATAAGAAATCCTCTGCTGTAGTTCCTGTTCTTTCGTTACGTTACCATTGTGCATGAAATGACAAATTGATCTCAATAGGATTTCC AGTTATTTAGGCACAGTAAATATGATTGCTTATCTGGTATTAATTGTCTGGCTTTCTGCATCATTCTTTATTCTTTGGATGGGAGTTGTCTATAACTTAG TGGCTTGTGTTAAATCTACATTTGGCCTGTAAGTTTGAAATTTAAGCTTTGAACTATAGTTAGGAATATCCTCTAGCTTCCTGAAAATTGCAACATTAGC AGGGTTCTAAAAAGAATTATCAAAAGCTTCACCTCATTTGGTTTGAAGGGAATGCTCCGAAGGAAGGAAAGCATGACTTTCTTAATGAGCCCAAACAGTA ATGGGTAGAAAACTCATGAGTTATAGACCATCTCAGCAGTTTATTAGCTATGGGAATTAATACCTTTTTTGGGCTGTCCACCTTTCTGTTCCTCTAGGTT TTAGATGCATCTCTTGCAGAGGATTCTGAACTCTGGATGTTCAATGATGTTCCAGAAAAAGAGAGGGAAAAGAAGCTAACAGATGGTGGCCTTGACATAA ATCGATTGGAAAATATTTCACTGGTTAATCGTGAGGGGAATGCTGTCATACGTCGTCACTTGGAAAGCCTTCCATTGGAATCATTTGATTCGGTAAGTAA CATTTATTTGCCTGTCTTCTATAGTTATATTATAAGTCCACCTGTTTTCCATTCTTCATGCATGTGGAGTCACCTATGGCTTCAGCAACAATACAATAAC TTAGTGGGGTATGCTCTCAGCCACAACACAATTTTATGGAGTAGTTATGTGCAAGTAGGGGTTAAACTATAACATGGGTAAATGTTTGGAAATCACGCCT ATAACATTTGTAATATGCAAAATATAATTTTGGGAATGTATCTTTTTAGATATAAAACCATGAGTCTTTATCTAACAACTTATGTTTTTGAGAGAGTTGT TCTTTGACATGCTACTGAAACTTTTATGACCACATGGTCAAGAGTTTGTTCCTCGCTACCCCACATTCTTCTAAATTAAAGTTGAAATTCAGAAGGAGTT AGAGTGGTCCTGTGAATTGTCCACATTTCAAACCCAACTGGCCTTTTTGTGAGAGGGTGTGTGTTAGATATACAACCATTCACTGAGTATGATTTGGTGC TTGACATTTTTGATGTAGTTTCTGATATGTGCAGATATTGATTTTGGCCGATGAATCAGTAGAGGATTCAGCAATTCAAGCCGACTCTAGATCTCTTGCC ACATTGCTTTTAATTCGTGACATACAAGCTAAGCGTCTTCCTTATAGTCAAGCTGATGGAGGAAGCTTCTCAAAAGGTTCATGGATGGGGGAAATGAAGC AGGCTTCAGATAAAACAGTTATAATCAGTGAAATTTTGGATCCAAGGACAAAAAATCTTTTATCTATGTCAAAAATTAGTGATTATGTTTTATCAAATGA ACTTGTCAGCATGGCTTTGGCCATGGTTGCAGAAGATCGACAGATAAATGACGTATTGGAAGAGCTATTTGCGGAGGAGGGAAATGAGATGCATATAAGG CAAGCAGATCTGTACCTGTTTGAAGGTGAGGAATTGAGTTTTTATGAAATAATGTTAAGAGCTCGGCAGAGAAGAGATATCGTGATAGGGTACCGTGTAG CGAATGCAGAGAGAGCAGTCATTAACCCACCAGCCAAAACTGATAGAAGGAAGTGGTCACTGAAGGATGTTTTTGTGGTCATTGCTGAAAAAGAATAAAT GAGGCATTTGTGGACAACAACTTCTGTACAATTTTGAGTCCAAACTTTGTACTTTTATGCTATGAAATGAAAAGTTGTTAAGTTCTGATGTACAAATAAG TGAAACTGTGGCAGTAACAGAAGGTTTTTATATACTAGATAGATCATTGTACTGAGAATTAATGTCACAAAAATCAAAAGGGTTACAGAAGAAATTCACA TTCTTGACTTGGTTCAGGAATGTCTGTATCTTTGTTCCTCATGTGACTAAATGAAAAACCACATAGGATGATTCATTCTTGGTTATTATCAGAGTTGTCG ACTTGGCTTAGGTATCATGTG BLAST |
Tissue | pods |
Gene name | LI_gene_147804; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513346
Blastp | Ion channel CASTOR from Lotus with 79.87% of identity |
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Blastx | Ion channel CASTOR from Lotus with 79.56% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440494.1) |
Pfam | Castor and Pollux, part of voltage-gated ion channel (PF06241.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |