| Id Trinity | TRINITY_DN46864_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_513336 |
| Sequence | TCCTCTCATACCATAAATTATAATACCGAAAATGTCCCTATATTCTGACTCACCGGCGGGTTCTTCCGGCAGAGATTGGCTCTTCCCGTCGCCGTCGTTT CCGCGGTCGTCACAAACACCGCAATACCGCCGTCGATTCCAGTCAAAGCTACACACACAACCCCAACCTTTTCCACACCGCCGGCGCGTAGTTCAATTCT CACGCGCTCCAACTTCAATTCCAACCGTTTCTGTTTCCGATGTGGAGAAGAAAGAAAAATCGTTTTCCAAGAAGTACTACAACTTCATCTGGTTTTCGCA ATTTCGTTATCACTTCGCTCTTGTGATTGTGACTATAACGTTTCTGGTGCTGTTGATTTTCAGAAATATATATCTACAAAGCCAACTCAATAAGTTGCAG GGTGAGATTGTCAGCCTTAATCTCAGATTATATGCTTACCATAAGTTGGATCCCCTAAACATTACCAGTGCTACAATTCAGGACCCTAATACTTTTGTGA GTGGAAACTTCAAAAGAAATCTAGCACTTTTTTCCTCCTTCACACTTCTATTTATCCCTCTTACTATTTTCAAGTACATAGACTATGTATCAAAGTCAAG ATTGTCTGACAATATATCAGAACAAATTTCTCTAAAGAAACAAATAGCATATTGGGTTGATGTCTTTTTATCAGTTCACCCATATGCTAAGCCACTTGTT TTGTTAGTTGCAACACTGTTGCTAATTTTTCTTGGAGGATTGGCCCTTTTTGGTGTGACTCCCGAGGATTTAGCACATTGCCTCTGGTTATCTTGGACCT ATGTTGCTGATTCTGGCAACCACGCCAGCTCCGAAGGTATTGGTCCCAGGTTAGTTGCGGTTTCCATTAGCTTTGGTGGGATGCTTATATTTGCAATGAT GCTTGGGCTTGTATCTGATGCAATTTCTGAGAAGTTTGATTCGCTGAGGAAAGGAAAAAGCGAGGTGGTTGAACAAAACCATACTTTGATTCTTGGCTGG AGCGATAAATTGGGTTCATTACTGAATCAGCTTGCCATAGCCAATGAGAACCTATGTGGGGGAACTGTTGTAGTGATGGCTGAGCGAGACAAGGAAGAAA TGGAGCTTGACATTGCAAAAATGGAGTTTGACTTCAAAGGAACATCTGTCATATGCAGAAGTGGCAGTCCCGTAATTTTAGCTGATCTGAAAAAGGTGTA ATGTCCTGTTTTATCCTTTTGTTTGGAAATGTGATTGTCTCTATCTATATTTTAATGTATGAATTCTATGTTGACATATATATTAAAGGATCGAGTAGAG CATCCCACAATTGTGATTTTCTCTATCTATATTTTTGGAAGACTAAGTAGTTTAGATATTTTGCTAGCCTTTCATTTTAAAATAGCTAACACTTGTTTTA GGAGGTCGGAAGAACTTCTTATCATAAACACATGTTGGTTTAATGTTATATTATTTTTCTAATTTCTTGCAGTAGCATTATGACATAAATGTCCACTTTC TGGTGGAATATATCACCTGCTGACTGGCACCATCTAAAGCTTTTGTTTGCTGAATTAGTTACTAATACCTTGTGATATACAGGTTTCTGTTTCAAAGGCT CGTGCAATAATTGTCCTTGCTGAAGATGGGAATGCTGATCAGAGTGATGCCCGCGCTTTGAGAACAGTCTTAAGTCTAACTGGAGTCAAAGATGGATTAC GAGGGCACATAGTGGTTGAGTTGAGTGATTTAGACAATGAGGTCCTTGTTAAACTTGTTGGTGGTGATCTTGTTGAAACTGTCGTAGCTCATGATGTCAT TGGTCGGTTGATGATTCAATGTGCTCGGCAGCCTGGACTTGCACAGATTTGGGAAGATATACTTGGATTCGAGAATTGTGAATTCTACATTAAAAGATGG CCGCAGTTGGATGGTATGCAATTTGAGGATGTATTGATCAGCTTTCCTGATGCAATTCCTTGTGGAGTCAAAGTTGCAGCACATGGTGGTAAAATTATTT TGAATCCAGATGACACCTATGTTCTACAAGCAGGTGATGAAGTTCTGGTCATTGCGGAGGATGATGATACCTATGCCCCAGTGTCCTTGCCTAAGGTTTG GAGGGGAAGCTTACCCAAGGACTTTGTTTGTCCAAAGTCTCCAGAAAGAATACTTTTTTGTGGTTGGAGGCGTGATATGGAGGACATGATCATGGTAATG CTATAAGAAATCCTCTGCTGTAGTTCCTGTTCTTTCGTTACGTTACCATTGTGCATGAAATGACAAATTGATCTCAATAGGATTTCCAGTTATTTAGGCA CAGTAAATATGATTGCTTATCTGGTATTAATTGTCTGGCTTTCTGCATCATTCTTTATTCTTTGGATGGGAGTTGTCTATAACTTAGTGGCTTGTGTTAA ATCTACATTTGGCCTGTAAGTTTGAAATTTAAGCTTTGAACTATAGTTAGGAATATCCTCTAGCTTCCTGAAAATTGCAACATTAGCAGGGTTCTAAAAA GAATTATCAAAAGCTTCACCTCATTTGGTTTGAAGGGAATGCTCCGAAGGAAGGAAAGCATGACTTTCTTAATGAGCCCAAACAGTAATGGGTAGAAAAC TCATGAGTTATAGACCATCTCAGCAGTTTATTAGCTATGGGAATTAATACCTTTTTTGGGCTGTCCACCTTTCTGTTCCTCTAGGTTTTAGATGCATCTC TTGCAGAGGATTCTGAACTCTGGATGTTCAATGATGTTCCAGAAAAAGAGAGGGAAAAGAAGCTAACAGATGGTGGCCTTGACATAAATCGATTGGAAAA TATTTCACTGGTTAATCGTGAGGGGAATGCTGTCATACGTCGTCACTTGGAAAGCCTTCCATTGGAATCATTTGATTCGATATTGATTTTGGCCGATGAA TCAGTAGAGGATTCAGCAATTCAAGCCGACTCTAGATCTCTTGCCACATTGCTTTTAATTCGTGACATACAAGCTAAGCGTCTTCCTTATAGTCAAGCTG ATGGAGGAAGCTTCTCAAAAGGTTCATGGATGGGGGAAATGAAGCAGGCTTCAGATAAAACAGTTATAATCAGTGAAATTTTGGATCCAAGGACAAAAAA TCTTTTATCTATGTCAAAAATTAGTGATTATGTTTTATCAAATGAACTTGTCAGCATGGCTTTGGCCATGGTTGCAGAAGATCGACAGATAAATGACGTA TTGGAAGAGCTATTTGCGGAGGAGGGAAATGAGATGCATATAAGGCAAGCAGATCTGTACCTGTTTGAAGGTGAGGAATTGAGTTTTTATGAAATAATGT TAAGAGCTCGGCAGAGAAGAGATATCGTGATAGGGTACCGTGTAGCGAATGCAGAGAGAGCAGTCATTAACCCACCAGCCAAAACTGATAGAAGGAAGTG GTCACTGAAGGATGTTTTTGTGGTCATTGCTGAAAAAGAATAAATGAGGCATTTGTGGACAACAACTTCTGTACAATTTTGAGTCCAAACTTTGTACTTT TATGCTATGAAATGAAAAGTTGTTAAGTTCTGATGTACAAATAAGTGAAACTGTGGCAGTAACAGAAGGTTTTTATATACTAGATAGATCATTGTACTGA GAATTAATGTCACAAAAATCAAAAGGGTTACAGAAGAAATTCACATTCTTGACTTGGTTCAGGAATGTCTGTATCTTTGTTCCTCATGTGACTAAATGAA AAACCACATAGGATGATTCATTCTTGGTTATTATCAGAGTTGTCGACTTGGCTTAGGTATCATGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_147804; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513336
| Blastp | Ion channel CASTOR from Lotus with 92.18% of identity |
|---|---|
| Blastx | Ion channel CASTOR from Lotus with 92.13% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440494.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |