Ll_transcript_513338

• Id Trinity: TRINITY_DN46864_c0_g1_i4
• Name Transcript: Ll_transcript_513338
• Sequence: TCCTCTCATACCATAAATTATAATACCGAAAATGTCCCTATATTCTGACTCACCGGCGGGTTCTTCCGGCAGAGATTGGCTCTTCCCGTCGCCGTCGTTT CCGCGGTCGTCACAAACACCGCAATACCGCCGTCGATTCCAGTCAAAGCTACACACACAACCCCAACCTTTTCCACACCGCCGGCGCGTAGTTCAATTCT CACGCGCTCCAACTTCAATTCCAACCGTTTCTGTTTCCGATGTGGAGAAGAAAGAAAAATCGTTTTCCAAGAAGTACTACAACTTCATCTGGTTTTCGCA ATTTCGTTATCACTTCGCTCTTGTGAAATATATATCTACAAAGCCAACTCAATAAGTTGCAGGGTGAGATTGTCAGCCTTAATCTCAGATTATATGCTTA CCATAAGTTGGATCCCCTAAACATTACCAGTGCTACAATTCAGGACCCTAATACTTTTGTGAGTGGAAACTTCAAAAGAAATCTAGCACTTTTTTCCTCC TTCACACTTCTATTTATCCCTCTTACTATTTTCAAGTACATAGACTATGTATCAAAGTCAAGATTGTCTGACAATATATCAGAACAAATTTCTCTAAAGA AACAAATAGCATATTGGGTTGATGTCTTTTTATCAGTTCACCCATATGCTAAGCCACTTGTTTTGTTAGTTGCAACACTGTTGCTAATTTTTCTTGGAGG ATTGGCCCTTTTTGGTGTGACTCCCGAGGATTTAGCACATTGCCTCTGGTTATCTTGGACCTATGTTGCTGATTCTGGCAACCACGCCAGCTCCGAAGGT ATTGGTCCCAGGTTAGTTGCGGTTTCCATTAGCTTTGGTGGGATGCTTATATTTGCAATGATGCTTGGGCTTGTATCTGATGCAATTTCTGAGAAGTTTG ATTCGCTGAGGAAAGGAAAAAGCGAGGTGGTTGAACAAAACCATACTTTGATTCTTGGCTGGAGCGATAAATTGGGTTCATTACTGAATCAGCTTGCCAT AGCCAATGAGAACCTATGTGGGGGAACTGTTGTAGTGATGGCTGAGCGAGACAAGGAAGAAATGGAGCTTGACATTGCAAAAATGGAGTTTGACTTCAAA GGAACATCTGTCATATGCAGAAGTGGCAGTCCCGTAATTTTAGCTGATCTGAAAAAGGTTTCTGTTTCAAAGGCTCGTGCAATAATTGTCCTTGCTGAAG ATGGGAATGCTGATCAGAGTGATGCCCGCGCTTTGAGAACAGTCTTAAGTCTAACTGGAGTCAAAGATGGATTACGAGGGCACATAGTGGTTGAGTTGAG TGATTTAGACAATGAGGTCCTTGTTAAACTTGTTGGTGGTGATCTTGTTGAAACTGTCGTAGCTCATGATGTCATTGGTCGGTTGATGATTCAATGTGCT CGGCAGCCTGGACTTGCACAGATTTGGGAAGATATACTTGGATTCGAGAATTGTGAATTCTACATTAAAAGATGGCCGCAGTTGGATGGTATGCAATTTG AGGATGTATTGATCAGCTTTCCTGATGCAATTCCTTGTGGAGTCAAAGTTGCAGCACATGGTGGTAAAATTATTTTGAATCCAGATGACACCTATGTTCT ACAAGCAGGTGATGAAGTTCTGGTCATTGCGGAGGATGATGATACCTATGCCCCAGTGTCCTTGCCTAAGGTTTGGAGGGGAAGCTTACCCAAGGACTTT GTTTGTCCAAAGTCTCCAGAAAGAATACTTTTTTGTGGTTGGAGGCGTGATATGGAGGACATGATCATGGTAATGCTATAAGAAATCCTCTGCTGTAGTT CCTGTTCTTTCGTTACGTTACCATTGTGCATGAAATGACAAATTGATCTCAATAGGATTTCCAGTTATTTAGGCACAGTAAATATGATTGCTTATCTGGT ATTAATTGTCTGGCTTTCTGCATCATTCTTTATTCTTTGGATGGGAGTTGTCTATAACTTAGTGGCTTGTGTTAAATCTACATTTGGCCTGTAAGTTTGA AATTTAAGCTTTGAACTATAGTTAGGAATATCCTCTAGCTTCCTGAAAATTGCAACATTAGCAGGGTTCTAAAAAGAATTATCAAAAGCTTCACCTCATT TGGTTTGAAGGGAATGCTCCGAAGGAAGGAAAGCATGACTTTCTTAATGAGCCCAAACAGTAATGGGTAGAAAACTCATGAGTTATAGACCATCTCAGCA GTTTATTAGCTATGGGAATTAATACCTTTTTTGGGCTGTCCACCTTTCTGTTCCTCTAGGTTTTAGATGCATCTCTTGCAGAGGATTCTGAACTCTGGAT GTTCAATGATGTTCCAGAAAAAGAGAGGGAAAAGAAGCTAACAGATGGTGGCCTTGACATAAATCGATTGGAAAATATTTCACTGGTTAATCGTGAGGGG AATGCTGTCATACGTCGTCACTTGGAAAGCCTTCCATTGGAATCATTTGATTCGATATTGATTTTGGCCGATGAATCAGTAGAGGATTCAGCAATTCAAG CCGACTCTAGATCTCTTGCCACATTGCTTTTAATTCGTGACATACAAGCTAAGCGTCTTCCTTATAGTCAAGCTGATGGAGGAAGCTTCTCAAAAGGTTC ATGGATGGGGGAAATGAAGCAGGCTTCAGATAAAACAGTTATAATCAGTGAAATTTTGGATCCAAGGACAAAAAATCTTTTATCTATGTCAAAAATTAGT GATTATGTTTTATCAAATGAACTTGTCAGCATGGCTTTGGCCATGGTTGCAGAAGATCGACAGATAAATGACGTATTGGAAGAGCTATTTGCGGAGGAGG GAAATGAGATGCATATAAGGCAAGCAGATCTGTACCTGTTTGAAGGTGAGGAATTGAGTTTTTATGAAATAATGTTAAGAGCTCGGCAGAGAAGAGATAT CGTGATAGGGTACCGTGTAGCGAATGCAGAGAGAGCAGTCATTAACCCACCAGCCAAAACTGATAGAAGGAAGTGGTCACTGAAGGATGTTTTTGTGGTC ATTGCTGAAAAAGAATAAATGAGGCATTTGTGGACAACAACTTCTGTACAATTTTGAGTCCAAACTTTGTACTTTTATGCTATGAAATGAAAAGTTGTTA AGTTCTGATGTACAAATAAGTGAAACTGTGGCAGTAACAGAAGGTTTTTATATACTAGATAGATCATTGTACTGAGAATTAATGTCACAAAAATCAAAAG GGTTACAGAAGAAATTCACATTCTTGACTTGGTTCAGGAATGTCTGTATCTTTGTTCCTCATGTGACTAAATGAAAAACCACATAGGATGATTCATTCTT GGTTATTATCAGAGTTGTCGACTTGGCTTAGGTATCATGTG
• Tissue: pods
• Gene name: LI_gene_147804;
• Additional information: details;

Expression of Ll_transcript_513338

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0.9
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_513338

• Blastp: Ion channel CASTOR from Lotus with 92.28% of identity
• Blastx: Ion channel CASTOR from Lotus with 87.04% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440494.1)
• Pfam: Castor and Pollux, part of voltage-gated ion channel (PF06241.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;