| Id Trinity | TRINITY_DN46864_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_513344 |
| Sequence | TCCTCTCATACCATAAATTATAATACCGAAAATGTCCCTATATTCTGACTCACCGGCGGGTTCTTCCGGCAGAGATTGGCTCTTCCCGTCGCCGTCGTTT CCGCGGTCGTCACAAACACCGCAATACCGCCGTCGATTCCAGTCAAAGCTACACACACAACCCCAACCTTTTCCACACCGCCGGCGCGTAGTTCAATTCT CACGCGCTCCAACTTCAATTCCAACCGTTTCTGTTTCCGATGTGGAGAAGAAAGAAAAATCGTTTTCCAAGAAGTACTACAACTTCATCTGGTTTTCGCA ATTTCGTTATCACTTCGCTCTTGTGATTGTGACTATAACGTTTCTGGTGCTGTTGATTTTCAGAAATATATATCTACAAAGCCAACTCAATAAGTTGCAG GGTGAGATTGTCAGCCTTAATCTCAGATTATATGCTTACCATAAGTTGGATCCCCTAAACATTACCAGTGCTACAATTCAGGACCCTAATACTTTTGTGA GTGGAAACTTCAAAAGAAATCTAGCACTTTTTTCCTCCTTCACACTTCTATTTATCCCTCTTACTATTTTCAAGTACATAGACTATGTATCAAAGTCAAG ATTGTCTGACAATATATCAGAACAAATTTCTCTAAAGAAACAAATAGCATATTGGGTTGATGTCTTTTTATCAGTTCACCCATATGCTAAGCCACTTGTT TTGTTAGTTGCAACACTGTTGCTAATTTTTCTTGGAGGATTGGCCCTTTTTGGTGTGACTCCCGAGGATTTAGCACATTGCCTCTGGTTATCTTGGACCT ATGTTGCTGATTCTGGCAACCACGCCAGCTCCGAAGGTATTGGTCCCAGGTTAGTTGCGGTTTCCATTAGCTTTGGTGGGATGCTTATATTTGCAATGAT GCTTGGGCTTGTATCTGATGCAATTTCTGAGAAGTTTGATTCGCTGAGGAAAGGAAAAAGCGAGGTGGTTGAACAAAACCATACTTTGATTCTTGGCTGG AGCGATAAATTGGGTTCATTACTGAATCAGCTTGCCATAGCCAATGAGAACCTATGTGGGGGAACTGTTGTAGTGATGGCTGAGCGAGACAAGGAAGAAA TGGAGCTTGACATTGCAAAAATGGAGTTTGACTTCAAAGGAACATCTGTCATATGCAGAAGTGGCAGTCCCGTAATTTTAGCTGATCTGAAAAAGGTTTC TGTTTCAAAGGCTCGTGCAATAATTGTCCTTGCTGAAGATGGGAATGCTGATCAGAGTGATGCCCGCGCTTTGAGAACAGTCTTAAGTCTAACTGGAGTC AAAGATGGATTACGAGGGCACATAGTGGTTGAGTTGAGTGATTTAGACAATGAGGTCCTTGTTAAACTTGTTGGTGGTGATCTTGTTGAAACTGTCGTAG CTCATGATGTCATTGGTCGGTTGATGATTCAATGTGCTCGGCAGCCTGGACTTGCACAGATTTGGGAAGATATACTTGGATTCGAGAATTGTGAATTCTA CATTAAAAGATGGCCGCAGTTGGATGGTATGCAATTTGAGGATGTATTGATCAGCTTTCCTGATGCAATTCCTTGTGGAGTCAAAGTTGCAGCACATGGT GGTAAAATTATTTTGAATCCAGATGACACCTATGTTCTACAAGCAGGTGATGAAGTTCTGGTCATTGCGGAGGATGATGATACCTATGCCCCAGTGTCCT TGCCTAAGGTTTGGAGGGGAAGCTTACCCAAGGACTTTGTTTGTCCAAAGTCTCCAGAAAGAATACTTTTTTGTGGTTGGAGGCGTGATATGGAGGACAT GATCATGGTTTTAGATGCATCTCTTGCAGAGGATTCTGAACTCTGGATGTTCAATGATGTTCCAGAAAAAGAGAGGGAAAAGAAGCTAACAGATGGTGGC CTTGACATAAATCGATTGGAAAATATTTCACTGGTTAATCGTGAGGGGAATGCTGTCATACGTCGTCACTTGGAAAGCCTTCCATTGGAATCATTTGATT CGTTTCTGATATGTGCAGATATTGATTTTGGCCGATGAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_147804; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513344
| Blastp | Ion channel CASTOR from Lotus with 81.35% of identity |
|---|---|
| Blastx | Ion channel CASTOR from Lotus with 81.09% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440494.1) |
| Pfam | Castor and Pollux, part of voltage-gated ion channel (PF06241.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |