| Id Trinity | TRINITY_DN46865_c1_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_512353 |
| Sequence | ATGATAATTCAATATAATTATTAATTATATAAAGTTTTGCATTTATATATAACTATATATTTATAGATAAAAATTATTAATTATATATTAAATTACCCGG TCAGACAAGACGATTTAACCACTTGAACTGGTTAAACCTAATACTGAACCTCTTCCGATTTGATGTCCAGCTTGGGTTTCATAACATTGATTATACTACA TTCTATTTTCATTCATTTTCTTCAAAAACTCAACTTAGAAGTAGACGTTTGCCAGTTTGTTTTGGAAGGAAAATAAGAGAAACGAAAGATTTTAGATTCA TCTCACGTAAGTATTTCATGAGCTACAAATCATCTCTTTCTTTTATTTTTTCTTCAAAATTCAAATCATAAATAACCCTTAAAATTGGACAAGAGAAGAA CAAATAGGAAAAAAATTCTAATTCAGTTTAACTAATTATGTGAGATAGTCTAGTAAAGGGTTAAGCCCCTTAATATAATAGATTAAGGAATGGAGAGACA AGTGACCCAAAATAACACATAAAAGACAAGTTGTAATGACACTTTTACCCTCTTATTTATTATAAAATCACAATTTTACCATTGAAAATATACATAAACC CAATTACCGAACAATAAATGCCTCATGTCTTATTAGTTGTCTTCATGTACAAAGCCAGAAAAGCAATCTCCTCAACCTTGTGGACTTACCTGTGTTACTT CTAGCCACAACTCTGCTTCTAGAAGAACTCCAAAAGGTAAAAGAAGAATAAGATGGACCAAGGATCTACATGAACCATTTATGATGATTGTTAATCGACT TGGTGGTCCACAAAAGGCAAAGCCTAAGGCTATACTAGAAGAGATGATAAAATCAGATAATTTGCTTTCCATTTCTCATGTTAAAAGTCATTTGCAGAAA TGTAGGACTACAATAAACATGCACAAAGCTATGCAGGAAAGATCTGAGGAAGGACATATAACAGATGGGGTTACTGATCTTCAAATAAAAATCCATATGC AAATTGAAGAGTCAAGGAAACTGCAGCTTGAAGTCCGGAAAAGTATTCACCAACAACTAGAGGTAACGAAAGAGTATCGCATATCCCACTTTCTATGTCT TATTATGTTCTAATCCAATTCAAAGTTGACATATACTTACAAAGAAAAATCATAAAGACGAAAAATATTTTTTTTATATTGAGGTTCGATCAGAATTACT GTTTTCATTACTCTCATTGCATTCATTATGGTCCTTGCAATGCAGACTCTTTGTAATCGTTATGGCGTAAATTATTTTATGATTAAAAAATATTTTTAGA TTTGATGCGATCTGACATTGCCACATGTGGTCCAAATGCAACTAGATACGTTGAGCTACAACCGAATGACCGCATCATTGTAGTATTGTGTCATATCTTA AAAAGAAAATTTTGAAAAATATAAATTAACATTTTTATATTACTTGGATGATGTTGATTAACCTGGAATATGCGGACATATCCATTTTGAGACAGAGGAT CCTTATTATCACGTTAAAAATATGTCTCTATTAGTACTGCATACATATCAAAAGTTAATTTACATGCATAAAGTAAGAAGTTTGAATCAATAATTTCTTA ATGAAACTCAGCCATTGCGTACATTTATATTTGGTAACCTTTTTATTCTTCTTTGGGCTTAGATGCAACGAAATTTGCAAGTGCTAATTCAACAGCAGGG GAAGCAGCTCAAAACAATGTTACATAATCAAAAGGAAAGAACAAAATTGGAGAAAATCCTTGGCACAGAACTTTATGTGAATGACTCAGAATGATTGGTC AATTGTATTGATAACCAAAATAATGTTGGATGGGGATCGGTTGTCCCAAAGCATGTCCCCAACCATGTACCAAACCAATCAGAACGAAGAAGATATAAAT AAAAATATGAATGTTTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_147815; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512353
| Blastp | Protein PHOSPHATE STARVATION RESPONSE 1 from Oryza sativa with 41.84% of identity |
|---|---|
| Blastx | Protein PHOSPHATE STARVATION RESPONSE 1 from Oryza sativa with 40% of identity |
| Eggnog | Myb-like DNA-binding domain containing protein, expressed(ENOG410YG61) |
| Kegg | Link to kegg annotations (4332726) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418724.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |