| Id Trinity | TRINITY_DN46874_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_512159 |
| Sequence | ATCGCTTTTTCTAAAAGAGAGAGGATGATGGTTGCCACAATGTTGTTGTGACAATTGTGAATGAAGAAAGTGCAACGAGTGTGGAAAATGACAATGGTGA GTAAAAGATGATCAAAATATGAAAATATCTGATAAATAGCGACAAAAATATAAATAATAGATATTGAAATGTCAAGTAAGAAAAGCGAGAGAGTTATCGA TTCTCCCCAATTCCCTCGCACTACTCAAATGTCTTCCCCTACCTCTCCCGTCGCCGATCCTCTTCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCGGC AGCGCTCGTGCTGGTTTGTTCGATGAGGGTGGAAAACTTCTTGGTTCATCAAGTAGTCCAATACAGATATGGAAAAACGGTGACTGTGTTGAGCAATCCT CTACAGATATATGGCTCGCAGTTTGTGCAGCTGTAAAAGCAGCCTGCTCTCAGGCAAAAGTTGCACCTATAGAAGTTAAGGGTCTGGGATTTGCAGCGAC TTGCTCTCTTGTCGCGGTGGATGCTGACAGCTCACCTGTTTCGGTTTCTTGGAGTGGTGATTCAAGAAGAAATGTGATAGTATGGATGGATCATAGAGCT GTTGAACAAGCTGAAAGGATCAATTCCTTTAACTCACCTGTACTACAGTACTGTGGTGGAGCTCTTTCACCCGAAATGCAACCACCAAAGCTTCTCTGGG TTAAAGAAAATTTGCAAGAATCCTGGGCTATGGTTTTCAGATGGATGGACTTGAGTGATTGGTTGTCATACAGGGCAACTGGAGATGATACTCGCAGTCT GTGCACCACAGTTTGTAAATGGACATATCTTGGTCATGCACACATGCAGCATATCAATGATCAAAACTCCCGAGATATGGAAGCTTGTGGGTGGGATGAT GAATTTTGGGAGGAAATTGGTTTGGGTGATCTCATTGAAGGACATCATGCTAAGATAGGACGAAGTGTTGCTTTCCCTGGCCATCCTCTGGGCTCTGGCC TTACTCCCACTGCTGCAAAGGAACTGGGTCTTGTACCGGGAATTCCTGTTGGGACATCACTAATTGATGCTCATGCTGGTGGGGTGGGGGTCATTGAAAG CGTGCCACCATCAGAAGCTGAAGAACATGACAAGGAAGCGATTTCCAACCGCATGGTGTTAGTTTGTGGAACTTCCACGTGCCATATGGGTGTATCACGG AGCAAATTATTTATCCCTGGGGTTTGGGGTCCATACTGGTCAGCAATGGTACCAGAATATTGGCTGACTGAAGGTGGGCAGAGTGCTACTGGTGCATTAT TGGATCATATAATTGAAAGCCATGCTGCTTCTCCACTACTTGCTAATCGAGCTGCTTCTCAAAAGATTTCAGTGTTTGAGTTTCTGAACAAGCTCCTGGA AACAATGATGATTGAGCAAAAGCAATCCTTTGTTGCTGCCTTGACTGAAGATTTACATGTTCTTCCTGACCACCATGGGAACAGGTCTCCCATTGCAGAT CCAAAATCAAAAGGAGTTATCTATGGTTTGACACTTGACACAAGTGAGAAACAGTTGGCTCTTCTATACCTAGCAGCTGTGCAGGGCATTGCGTATGGCA CCCGTCACATTGTAGAGCATTGCAATGCCCATGGCCACAAAGTAAGGATGCACAATGCTATTACATGCATTTGATGTTTTTACTACTTTTTTTGCCTTTG CTTGTCATTACTTAGGTTGTTGATGCAGATTTGATGGCTTTTATTACTGTGATTGTTCTGCATTTGCTTGCAGATCAACACTCTTCTTGCATGTGGTGGC CTATCAAAGAACCCTATCTACATTCAGGAACATGCTGATATTATTGGTATTATTGAGTGTTTTTTATTGGATCTTTTTCATTGTGTTACACACTCTGATA CGATATCATTTTCGTAAATATTCTGTGTGGACTTTTTTCAGTGTGACAAATGACACTTGTGTTCCAATTTTAAAGGGTAGCAAAAATATGCTAGCATCTA GGGTTTCTTACCCTGTCCAATGATAACCATTAAAATAACAAAATAATAATAACTCAGTAATTTAGCTGTAGAAAAACAGGATAATTAGTCAAGAACTTCA ATCTTATATGAAATATATCTAAATTGCGTGTATATAATACAACCTTGCTAGACAGCTAGTATCTCAAACTTTGTCATCAGCAGAATTATTTGGCATCTTA TGCTCCCTCGCGATATTAGGTTGTAGTTGTTCCATGATCTGGACTCTATCTTATTTTATATTTTTAATTCATTAATAAAAAATGATTAAGTTTCCTGTGT CCAAATAATAAGAAATGACGAAGAAGGTATCAGAACATTAGTTTATACTAATTTTAAAAAAATAGCGAATCACAATTATAATTGTCCCAGGTTGCCCTAT TATTCTTCCAAGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_147879; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512159
| Blastp | FGGY carbohydrate kinase domain-containing protein from Xenopus with 49.35% of identity |
|---|---|
| Blastx | FGGY carbohydrate kinase domain-containing protein from Xenopus with 45.94% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (447059) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463457.1) |
| Pfam | FGGY family of carbohydrate kinases, N-terminal domain (PF00370.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |