Id Trinity | TRINITY_DN46875_c1_g1_i10 |
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Name Transcript | Ll_transcript_512602 |
Sequence | ATAGTACAACAGTGTTGTTGTTAGTGAGAGAACTGAGAACTGAAACTGATCTTGGTACTTCACATTTTCTATTTGATTCTTTCCCATACTCACTTTAAAC TTCAAAACCAGTCATGGGTCTAGATAAATGGATCAACTTTTTCATGATTCTTAATTTCTTTGCTGCAATAACACCCATCTTCTCAGATTCCAGCTCCTTT ACTTCCAAGTTCCTTGATTTGGCTAAGGAGCCTCATGTTTTTGATTGGATGGTGGATATTAGAAGGAAGATTCATGAGAATCCTGAAACGGGTTTTGAAG AATTTAAGACCAGTGAGCTTATAAGATCAGAATTGAAAAAGTTGAAGATTCCATATAAACACCCTGTTGCAATTACTGGTGTTATTGGATACATAGGAAC TGGAAAACCTCCCTTTGTTGCTATAAGAGCTGACATGGATGCTCTTCTTATGCAGGTTTTACATATTTTATATTTTATCCTTTTTTCTTAGGTGTATTGT AGAGTGTGTTGTTGGTTAGTTGTGATAAATATACAAGTTCATGTACTTGATCATAATAGAATTGAGAGTGTTTGGAAGAATTTGTTGAAAGCTTATCTTG AATTTTGAGAAATTTCATTCTTTAAAATTTCAACATTTCTAACCATGTCCTTGACAGTGCTTCTAGGAGGGTTTGACTTAAATTTTGATTTTTTATAGGT CATTTTTCTGGGGTTGAGGTACACACAAAAAAGAACAGATTTTTATTACAAGACCTTCCCTTTTCTAACTTTGATGTCTAGATATGTTAGATTGTGCTGT TTGGCTTGATCTATGCTTTTATTGATATTTTGGGCTGTGTCTAACATCAGGAGCTGGGGGATTGGGAGCACAAGAGTAAAGTACCTGGGAAGATGCATGC ATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAACATGAAAAAGATATACCGGGAACTGTTGTTCTTGTTTTTCAA CCAGCAGAGGAAGGAGGAGGAGGGGCTAAGAAAATCGTAGATGTTGGAGCCTTAGAAAATATTTCTGCAATATTCGGTTTGCATGTTGCACCTCACGTCC CATTGGGTGAAGTCGCCTCTAGGTCTGGTCCCATTGGTGCAGGAAGCTCCTTATTTGAAGCAAGAATAAGTGGTAAGGGAGGCCATGCCGCTATTCCTCA TCATGCTATAGACCCGATATTGGCAGCTTCTAACGTAATTGTTAGCTTACAACATCTTGTTTCTCGCGAGGCTGATCCTCTCGACTCCCAGGTGATATCT TATTTCATTTTTTCCTTTCCCTTCACGCCACCCAAACACTTATTCTTATTTTACCTTTACTTTAATAAGATCAGCTAGCCTATCTTCGATTTCGTTACTT CAACTATGTAATGGGTTTAAAGAACAAAGACAAGTAAAACGAAATTATTGGCAGAGCTTAAGCCAGCAAACCATTTCCCTAGCAATTTTTGGCTTCCCTC GAATTCACTCACTTTCTTTTTTTTCTTAGCACATGTACTTTCGAAGTATCATCAGTTCCACTTTATTGTCACTTTACATAATTTGAGACCTTCTACTTGT TTATCATGGTATGAAGCCTTAAAAAAAATAATTCTTATGGTCTTGTACTTAGATATATAATCAAAGAATGGAGATTCTCGCGACTCATACAACACTTATG TTGGAGGCAGTGTCTTGATTACCGTTTTACCTATTTGAGAAAGAAAGTGTTTAATTGAATATTACAAAATGATTGTTTCAAGAAGTAGTTCATCTCGTGT CTTCCTAACACAAGGTATCCCCACAGGTTGTGACCGTGGGAAAAATCCAAGGTGGTGGTGCATTCAACGTTATTCCAGATTCTGTCACAATTGGGGGCAC CGTCCGAGCTTTTACAAAAGAAAGCATGATGCAGCTGAGACGGCGGATTGAGCAGGTCTGTCATGGAGAACTGTAGATTTATTTTTATGCTCAAACTATA ACTAACCAGCTCATTTTTTTGTCAATACATCACTAACTCAATCGTGTTGACTTTCTTTCTTTTGTACTCAATCTCATTTGGTTTTTGTTGTAACGAAGAA ACGATCACACTCTAATTGTAGTTTTGACTGCAATCCTGTTAGTGGCTAAGGCTGATTCATTTATGTAGGTTATCATCGGGCAAGCGGCTGTGCAGAGGTG CAATGCAACGGTTAGCTTCCTCGATAAAGAGAACCCTTACTTCCCCCCAACTGTAAACACCGATGACTTGCATGATTATTTTAAAAGTGTTGCTGGGAGC GTGCTTGGCGTCGATAAAGTTAAGGAGATACAACCAATGATGGGATCTGAGGACTTTTCATTCTATCAGGAGGTTATACCCGGATACTTCTTCCTCCTTG GAATGGTGAATTCCTCTGTTGAACATCTTGAGTCAGCACACTCTCCTTATTTCAAAGTCAATGAAGATGCACTACCGTATGGAGCTGCACTCCATGCATC ATTATCTGCTAGGTATCTTCTCAAACTTCATCAGGATGTACCAGTGGTAGAGGGGAAATATAATGATGAATTATAAACATGCTTGCAACGCGGCATTGTT ATTTTTAAAACATGCTTTAGTTGCAAATGTATTGCATTCAAGTTAAATAAGTTAGTTTCAGCTTTAAAATCATCGATTGTGCTGATCTACGGGGCGGTAG GAGAAGGAAAGAAGTAAAAAAAAAAGTTCTAAATCATTGATTTGGGTTATTTGCATGAGGTTACAAACTCAAACAACATTACCAAGTTTGTACCCAAAAA ATATGATGTTGTGTATACTTTCTTTCTCCAAGTAACAAAGTTTCATCTTTATTGTTGTTTTTTTTGCAAAGAAGTTTCTTTTTCATTTAATGTGTATGTA ACTTGCAATTTCAATTTATACTGTGGTAAACATGTGTTTAGTGAAAATTTTCAGTTAATGGCTTTGGATGCTATATCAAAAATAGGATACAGCATTAAGT GAAAATTTTCTAGCAAATAGGAAAGAAAGTGAAGTTGGTTGGTTACTGTATAGACATGTCTGTACTTCCAAAATTTCCTTGAATAAATCATGTGTTTAGT TTAGTGATACCACAAGTAGCTTAAAAGCTAGTAGACAAAAAAAAAAAATAAAATTCATTTTGGTGTTAGATAAAATGTAACATATTTGGATAAGCTATTA GCTTATAAGCTCATGCTTATTAAGTTACTTGAGGTGAGTTATGATTAATAAGTTACAAGTTTATATGTTTTACACCTACCAACTTGCTTATCAGTGAATC ATATCAAACAATTATGATCCAATCAACAGATTATTATACTATACCTACTAATTTGCTTAGCCTGATGAACACCACCCATTGATCAGTTCAACATAGCATC CTGTCGAAATGCAG BLAST |
Tissue | pods |
Gene name | LI_gene_147885; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512602
Blastp | IAA-amino acid hydrolase ILR1-like 2 from Arabidopsis with 68.82% of identity |
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Blastx | IAA-amino acid hydrolase ILR1-like 4 from Arabidopsis with 78.15% of identity |
Eggnog | amidohydrolase(COG1473) |
Kegg | Link to kegg annotations (AT5G56660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448193.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |